We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
EXOSC10
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:16.6RPKM
FANTOM5:55.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA028470

 

Antibody HPA028484

 

Antibody CAB037141

 

Glial cells

Low   Low   Low  

Neuronal cells

Not detected   Medium   Medium  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

16.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 16.6
Samples: 117

Max RPKM: 29.4
Min RPKM: 5.7
Std RPKM: 4.4
Median RPKM: 16.7
GTEX-132Q8-0011-R5a-SM-5IJDM 29.4
GTEX-X585-0011-R5A-SM-46MVI 25.8
GTEX-QMR6-0011-R5A-SM-32PKT 25.4
GTEX-RVPU-0011-R5A-SM-2XCAD 24.1
GTEX-P44H-0011-R5A-SM-2XCEX 23.7
GTEX-12WSF-0011-R5a-SM-5HL8K 23.6
GTEX-XMD1-0011-R5A-SM-4AT47 23.5
GTEX-N7MT-0011-R5a-SM-2I3G6 23.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 22.6
GTEX-13X6I-0011-R5a-SM-5PNWW 22.6
GTEX-13X6K-0011-R5b-SM-5PNUE 22.4
GTEX-PVOW-0011-R5A-SM-32PL7 22.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 22.1
GTEX-13NYS-0011-R5a-SM-5MR4D 21.9
GTEX-14BIM-0011-R5b-SM-5S2RM 21.9
GTEX-X4XX-0011-R5A-SM-46MWN 21.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 21.6
GTEX-13FXS-0011-R5b-SM-5LZYE 21.5
GTEX-RVPV-0011-R5A-SM-2TF69 21.4
GTEX-WVLH-0011-R5A-SM-3MJFW 21.4
GTEX-UTHO-0011-R5A-SM-3GIJD 20.7
GTEX-WL46-0011-R5A-SM-3LK6V 20.7
GTEX-13OVH-0011-R5b-SM-5KM4L 20.3
GTEX-X261-0011-R5A-SM-3NMB4 20.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 20.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 19.9
GTEX-N7MS-0011-R5a-SM-2HMK8 19.8
GTEX-11H98-0011-R5b-SM-57WCF 19.7
GTEX-QVJO-0011-R5A-SM-2S1QM 19.7
GTEX-TSE9-0011-R5A-SM-3DB7J 19.7
GTEX-13NYB-0011-R5a-SM-5MR45 19.3
GTEX-13O3O-0011-R5b-SM-5KM44 19.2
GTEX-OHPN-0011-R5A-SM-2I5FF 19.2
GTEX-13OW6-0011-R5a-SM-5O9BK 19.1
GTEX-13JUV-0011-R5a-SM-5LZY5 19.0
GTEX-11NV4-0011-R5a-SM-5NQ88 18.6
GTEX-1399T-0011-R5b-SM-5IJDK 18.6
GTEX-WZTO-0011-R5B-SM-3NMC5 18.4
GTEX-13CZV-0011-R5a-SM-5K7XA 18.2
GTEX-13S7M-0011-R5b-SM-5P9HS 18.1
GTEX-11GSP-0011-R5a-SM-57WBE 18.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 18.0
GTEX-13FLW-0011-R5a-SM-5LZX6 17.6
GTEX-14ABY-0011-R5b-SM-5SI7B 17.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 17.5
GTEX-RU72-0011-R5A-SM-2TF6U 17.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 17.5
GTEX-13OW5-0011-R5b-SM-5L3FR 17.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 17.4
GTEX-13OVL-0011-R5b-SM-5L3FU 17.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 17.3
GTEX-12WSD-0011-R5b-SM-5CVNG 17.2
GTEX-13G51-0011-R5a-SM-5L3EB 17.2
GTEX-145MH-0011-R5a-SM-5P9JT 17.2
GTEX-R55E-0011-R5A-SM-2TC5N 17.2
GTEX-13FLV-0011-R5a-SM-5LZWT 16.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 16.7
GTEX-13VXU-0011-R5a-SM-5O9D7 16.7
GTEX-NPJ7-0011-R5a-SM-33HBK 16.7
GTEX-S7SE-0011-R5A-SM-2XCDA 16.6
GTEX-ZUA1-0011-R5b-SM-51MTG 16.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 16.5
GTEX-YFC4-0011-R5a-SM-4RGLR 16.5
GTEX-ZXG5-0011-R5b-SM-57WBN 16.4
GTEX-131YS-0011-R5b-SM-5K7YB 16.1
GTEX-139TS-0011-R5b-SM-5J2MZ 16.1
GTEX-WWYW-0011-R5A-SM-3NB3E 16.1
GTEX-12WSC-0011-R5b-SM-5CVNS 16.0
GTEX-13SLX-0011-R5a-SM-5O9BV 16.0
GTEX-T2IS-0011-R5A-SM-32QP4 16.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 15.9
GTEX-XOTO-0011-R5A-SM-4B657 15.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 15.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 15.8
GTEX-145LS-0011-R5a-SM-5SI65 15.6
GTEX-13OW7-0011-R5b-SM-5O9DM 15.4
GTEX-139T8-0011-R5b-SM-5J1MO 15.3
GTEX-ZE7O-0011-R5a-SM-57WBO 15.1
GTEX-144GO-0011-R5a-SM-5PNUR 15.0
GTEX-14BIN-0011-R5b-SM-5SI78 15.0
GTEX-NL4W-0011-R5a-SM-2I3GD 15.0
GTEX-13JVG-0011-R5a-SM-5MR4O 14.7
GTEX-Z93S-0011-R5b-SM-4RGNI 14.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 14.2
GTEX-T6MN-0011-R5A-SM-32QPD 14.1
GTEX-1445S-0011-R5a-SM-5PNUS 14.0
GTEX-1313W-0011-R5b-SM-5L3EP 13.9
GTEX-13X6J-0011-R5b-SM-5PNWT 13.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 13.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 13.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 13.0
GTEX-13FHP-0011-R5b-SM-5LZY2 12.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 12.8
GTEX-11WQC-0011-R5a-SM-5BC74 12.3
GTEX-12WSB-0011-R5b-SM-5GU67 12.3
GTEX-144GL-0011-R5b-SM-5PNUJ 12.3
GTEX-OXRN-0011-R5A-SM-2I5EF 12.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 12.2
GTEX-T5JC-0011-R5A-SM-32PLK 12.2
GTEX-11OF3-0011-R5a-SM-57WB4 12.1
GTEX-12WSA-0011-R5b-SM-5GU5I 11.9
GTEX-12ZZX-0011-R5a-SM-5HL89 11.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 11.4
GTEX-NL3H-0011-R5a-SM-2I3GB 11.3
GTEX-ZV68-0011-R5a-SM-4YCDW 10.9
GTEX-13112-0011-R5b-SM-5DUV8 10.6
GTEX-S7PM-0011-R5A-SM-3NM8G 10.3
GTEX-11UD1-0011-R5b-SM-5P9FP 9.8
GTEX-ZVT3-0011-R5a-SM-51MSI 9.7
GTEX-1477Z-0011-R5b-SM-5PNUO 9.6
GTEX-YJ89-0011-R5a-SM-4V6GM 9.2
GTEX-13CF2-0011-R5a-SM-5LZWS 8.7
GTEX-139TT-0011-R5b-SM-5K7W8 8.0
GTEX-13CIG-0011-R5b-SM-5L3F2 7.7
GTEX-12WSH-0011-R5b-SM-5P9F3 6.5
GTEX-13NZA-0011-R5b-SM-5KM4K 6.2
GTEX-145MG-0011-R5b-SM-5S2VU 5.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

55.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 55.9
FF:10164-103B2 76 years, female 65.2
FF:10379-105H1 89 years, female 46.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.