Tissue expression of TRAPPC12 - Summary - The Human Protein Atlas

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TRAPPC12

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	TRAPPC12
Gene description	Trafficking protein particle complex 12
Protein class	Plasma proteins Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	7
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Nuclear expression in most tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Sub cellular location is contradicted by external data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA034799
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	TRAPPC12 (HGNC Symbol)
Synonyms	CGI-87, TTC-15, TTC15
Description	Trafficking protein particle complex 12 (HGNC Symbol)
Entrez gene summary
Chromosome	2
Cytoband	p25.3
Chromosome location (bp)	3379675 - 3485094
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000171853 (version 83.38)
Entrez gene	51112
UniProt	Q8WVT3 (UniProt - Evidence at protein level)
neXtProt	NX_Q8WVT3
Antibodypedia	TRAPPC12 antibodies

PROTEIN BROWSER

TRAPPC12-001	TRAPPC12-002	TRAPPC12-006	TRAPPC12-007	TRAPPC12-016	TRAPPC12-021	TRAPPC12-023

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TRAPPC12-001 ENSP00000371544 ENST00000382110	Q8WVT3 [Direct mapping] Trafficking protein particle complex subunit 12 Show all	SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Plasma proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0004175 [endopeptidase activity] GO:0005515 [protein binding] GO:0005793 [endoplasmic reticulum-Golgi intermediate compartment] GO:0006508 [proteolysis] GO:0016192 [vesicle-mediated transport] Show all	735 aa 79.4 kDa	No	0
TRAPPC12-002 ENSP00000324318 ENST00000324266	Q8WVT3 [Direct mapping] Trafficking protein particle complex subunit 12 Show all	SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0004175 [endopeptidase activity] GO:0005515 [protein binding] GO:0005793 [endoplasmic reticulum-Golgi intermediate compartment] GO:0006508 [proteolysis] GO:0016192 [vesicle-mediated transport] Show all	735 aa 79.4 kDa	No	0
TRAPPC12-006 ENSP00000401013 ENST00000457845	H7C1M4 [Direct mapping] Trafficking protein particle complex subunit 12 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0004175 [endopeptidase activity] GO:0006508 [proteolysis] Show all	36 aa 4.4 kDa	No	0
TRAPPC12-007 ENSP00000409960 ENST00000441983	H7C373 [Direct mapping] Trafficking protein particle complex subunit 12 Show all	SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0004175 [endopeptidase activity] GO:0006508 [proteolysis] Show all	192 aa 21.7 kDa	No	0
TRAPPC12-016 ENSP00000396592 ENST00000415624	H7C0T3 [Direct mapping] Trafficking protein particle complex subunit 12 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0004175 [endopeptidase activity] GO:0005515 [protein binding] GO:0006508 [proteolysis] Show all	234 aa 26.4 kDa	No	0
TRAPPC12-021 ENSP00000395420 ENST00000416918	H7C0K3 [Direct mapping] Trafficking protein particle complex subunit 12 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0004175 [endopeptidase activity] GO:0005515 [protein binding] GO:0006508 [proteolysis] Show all	122 aa 13.7 kDa	No	0
TRAPPC12-023 ENSP00000396407 ENST00000452495	H0Y550 [Direct mapping] Trafficking protein particle complex subunit 12 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0004175 [endopeptidase activity] GO:0005515 [protein binding] GO:0006508 [proteolysis] Show all	109 aa 12 kDa	No	0

Contact

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.