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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.3TPM
GTEx:10.1RPKM
FANTOM5:73.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody CAB017194

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 High  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 
 

Antibody staining

Antibody CAB017194

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

20.3
N/A Female, age 80
Sample 1
TPM: 17.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 26.1
N/A Female, age 57
Sample 3
TPM: 24.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 11.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 22.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.3
Samples: 350

Max RPKM: 28.5
Min RPKM: 3
Std RPKM: 4.9
Median RPKM: 10.4
GTEX-ZXES-2026-SM-5NQ6R 28.5
GTEX-14DAR-1926-SM-5S2NQ 26.2
GTEX-14BMU-2126-SM-5S2TS 24.5
GTEX-145ME-1926-SM-5SI9S 23.0
GTEX-ZPCL-2126-SM-57WFZ 22.9
GTEX-TKQ1-1126-SM-4GIAZ 22.4
GTEX-PLZ6-1326-SM-3NB24 22.0
GTEX-PWCY-1926-SM-3NB25 21.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 8.3
Samples: 227

Max RPKM: 20.5
Min RPKM: 1.5
Std RPKM: 3.8
Median RPKM: 7.5
GTEX-ZF2S-1526-SM-5S2OO 20.5
GTEX-WYJK-1426-SM-3NM8V 20.4
GTEX-ZF29-0826-SM-5S2NP 19.8
GTEX-1211K-1226-SM-5EQ4N 17.6
GTEX-ZT9W-1026-SM-57WG5 17.5
GTEX-131XG-0126-SM-5K7UJ 16.4
GTEX-Y5V5-0226-SM-5S2N8 16.4
GTEX-ZPCL-1026-SM-5GCOX 16.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

73.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 73.9
FF:10010-101C1 65,65,76 years, mixed 73.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.