Tissue expression of CDY1B - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	CDY1B
Gene description	Chromodomain protein, Y-linked, 1B
Protein class	Enzymes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enriched (testis)
GTEx:	Not detected

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Not detected

GENE INFORMATION
Gene name	CDY1B
Synonyms
Description	Chromodomain protein, Y-linked, 1B (HGNC Symbol)
Entrez gene summary	This gene encodes a protein containing a chromodomain and a histone acetyltransferase catalytic domain. Chromodomain proteins are components of heterochromatin-like complexes and can act as gene repressors. This protein is localized to the nucleus of late spermatids where histone hyperacetylation takes place. Histone hyperacetylation is thought to facilitate the transition in which protamines replace histones as the major DNA-packaging protein. The human chromosome Y has two identical copies of this gene within a palindromic region; this record represents the more centromeric copy. Chromosome Y also contains a pair of closely related genes in another more telomeric palindrome as well as several related pseudogenes. Two protein isoforms are encoded by transcript variants of this gene. Additional transcript variants have been described, but their full-length nature has not been determined. [provided by RefSeq, Jul 2008]
Chromosome	Y
Cytoband	q11.23
Chromosome location (bp)	24045229 - 24048019
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000172352 (version 83.38)
Entrez gene	253175
UniProt	Q9Y6F8 (UniProt - Evidence at protein level)
neXtProt	NX_Q9Y6F8
Antibodypedia	CDY1B antibodies

PROTEIN BROWSER

CDY1B-001	CDY1B-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CDY1B-001 ENSP00000371844 ENST00000382407	Q9Y6F8 [Direct mapping] Testis-specific chromodomain protein Y 1 Show all	Enzymes ENZYME proteins Transferases Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Show all	GO:0003824 [catalytic activity] GO:0004402 [histone acetyltransferase activity] GO:0005634 [nucleus] GO:0007283 [spermatogenesis] GO:0008152 [metabolic process] GO:0016573 [histone acetylation] GO:0035064 [methylated histone binding] Show all	540 aa 60.5 kDa	No	0
CDY1B-002 ENSP00000303178 ENST00000306882	Q9Y6F8 [Direct mapping] Testis-specific chromodomain protein Y 1 Show all	Enzymes ENZYME proteins Transferases Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Show all	GO:0003824 [catalytic activity] GO:0004402 [histone acetyltransferase activity] GO:0005634 [nucleus] GO:0007283 [spermatogenesis] GO:0008152 [metabolic process] GO:0016573 [histone acetylation] GO:0035064 [methylated histone binding] Show all	554 aa 62 kDa	No	0