Tissue expression of IQCB1 - Staining in colon

COLON - Expression summary

RNA expression

HPA:	13.0	TPM
GTEx:	8.5	RPKM
FANTOM5:	14.8	Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM	13.0

Male, age 54

Sample 1
TPM: 11.8

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 11.1

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 8.4

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 10.8

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 12.8

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 11.3

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 13.6

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 15.5

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 12.8

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 16.2

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 17.6

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 12.7

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 14.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	8.5

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.3

Samples: 149

Max RPKM: 15.3
Min RPKM: 4.9
Std RPKM: 1.8
Median RPKM: 8

GTEX-11WQK-2526-SM-5CVL8

15.3

GTEX-13O1R-2426-SM-5KLZZ

14.4

GTEX-12ZZY-2726-SM-5EQ45

13.1

GTEX-ZTTD-2626-SM-57WEX

12.4

GTEX-1477Z-2126-SM-5Q5CM

12.2

GTEX-ZAJG-2626-SM-5S2NU

12.2

GTEX-14A5I-2426-SM-5Q5CP

11.9

GTEX-14E6C-2226-SM-5QGQG

11.3

Show all

Colon - Transverse

Colon - Transverse
RPKM: 8.7

Samples: 196

Max RPKM: 16.4
Min RPKM: 4.6
Std RPKM: 1.9
Median RPKM: 8.3

GTEX-ZYVF-2826-SM-5GIDK

16.4

GTEX-12KS4-2426-SM-5LU8P

14.9

GTEX-11WQK-2126-SM-5EQME

14.8

GTEX-13OW6-2126-SM-5N9GL

14.0

GTEX-VJYA-2026-SM-4KL1K

13.3

GTEX-13OVJ-1726-SM-5IJDZ

13.2

GTEX-R53T-1326-SM-48FCQ

12.6

GTEX-133LE-1526-SM-5IFEN

12.2

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	14.8

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 14.8

FF:10014-101C5

62,83,84 years, mixed

14.8