Tissue expression of SNCG - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	22.1	TPM
GTEx:	9.4	RPKM
FANTOM5:	43.1	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA014404	Antibody CAB001452	Antibody CAB040581
Squamous epithelial cells	Not detected	Not detected	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	22.1

Female, age 70

Sample 1
TPM: 27.0

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 24.7

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 14.4

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	9.4

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 9.4

Samples: 286

Max RPKM: 41.3
Min RPKM: 1.5
Std RPKM: 6.1
Median RPKM: 7.7

GTEX-OIZG-1026-SM-3LK5X

41.3

GTEX-13QJ3-1726-SM-5RQK9

36.9

GTEX-ZYT6-1126-SM-5GZYR

32.8

GTEX-11TUW-1326-SM-5EQKV

29.4

GTEX-13OW8-2326-SM-5L3I9

27.0

GTEX-RN64-1026-SM-48FDX

25.4

GTEX-YB5E-0926-SM-4WWDQ

25.1

GTEX-T8EM-0526-SM-4DM64

24.7

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	43.1

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 43.1

FF:10015-101C6

68,74,75 years, mixed

43.1