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TOMM20

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:62.6TPM
GTEx:39.2RPKM
FANTOM5:124.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA011562

  

Antibody CAB005585

  

Endothelial cells

 Medium   High  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 High   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

62.6
overview Male, age 54
Sample 1
TPM: 61.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 63.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 56.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 68.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 43.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 56.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 81.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 69.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 59.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 73.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 61.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 68.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 50.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

39.2

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 40.2
Samples: 149

Max RPKM: 72.6
Min RPKM: 22
Std RPKM: 10
Median RPKM: 37.8
GTEX-1399U-2226-SM-5KLZI 72.6
GTEX-Y9LG-1326-SM-4VBQB 71.7
GTEX-148VJ-2426-SM-5NQ9Y 69.0
GTEX-ZT9W-1726-SM-51MS3 61.8
GTEX-13PVR-1726-SM-5Q5EC 61.1
GTEX-12696-1926-SM-5EGJT 60.9
GTEX-13X6K-2726-SM-5O9DG 59.3
GTEX-13VXT-2026-SM-5L3EW 59.1
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 38.4
Samples: 196

Max RPKM: 76.7
Min RPKM: 17
Std RPKM: 9
Median RPKM: 37.5
GTEX-11TTK-2426-SM-5PNYO 76.7
GTEX-148VJ-2626-SM-5QGPI 65.8
GTEX-Y114-1526-SM-4TT79 64.3
GTEX-11P81-1126-SM-5GU5G 63.7
GTEX-1128S-1626-SM-5H12O 58.0
GTEX-13OVI-2026-SM-5J1MU 57.7
GTEX-ZYVF-2826-SM-5GIDK 57.7
GTEX-ZXES-1626-SM-5NQ7L 56.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

124.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 124.0
FF:10014-101C5 62,83,84 years, mixed 124.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.