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Term
Gene name

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External id

In atlas

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Reliability

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Validation

Method

Validation

Method

Validation

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Cell type

Expression

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Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

Category

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Score

Score

Antibodies

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SH3PXD2B
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.0TPM
GTEx:11.4RPKM
FANTOM5:31.9Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA036471

 

Glandular cells

Medium  
 
 

PROSTATE - HPA RNA-seq

Average TPM

14.0

overview Male, age 62
Sample 1
TPM: 10.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 12.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 10.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 12.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 16.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 16.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 15.1
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 9.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 22.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

11.4

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 11.4
Samples: 106

Max RPKM: 32.3
Min RPKM: 4.8
Std RPKM: 4.2
Median RPKM: 10.9
GTEX-QLQ7-1326-SM-4R1JY 32.3
GTEX-V955-1826-SM-4JBIL 26.4
GTEX-131XF-1926-SM-5DUW4 25.4
GTEX-13O61-1726-SM-5KM46 19.4
GTEX-XPVG-2026-SM-4B65E 18.5
GTEX-XAJ8-0626-SM-47JY4 18.1
GTEX-11ZUS-2126-SM-5N9E6 18.0
GTEX-NPJ8-2426-SM-3MJHL 17.8
GTEX-14C5O-2826-SM-5RQI6 17.6
GTEX-RM2N-1126-SM-48FCY 16.3
GTEX-T8EM-1826-SM-4DM7F 15.9
GTEX-12BJ1-1226-SM-5LUAE 15.3
GTEX-13RTJ-2126-SM-5S2PZ 15.3
GTEX-U412-2026-SM-4DXSI 14.9
GTEX-YJ8A-1126-SM-5IFJU 14.9
GTEX-XGQ4-1826-SM-4AT6F 14.7
GTEX-13N2G-1826-SM-5KM1I 14.6
GTEX-12696-2226-SM-5EQ65 14.1
GTEX-OOBK-2025-SM-3LK5S 13.8
GTEX-111YS-1726-SM-5GIED 13.7
GTEX-11EQ9-1726-SM-5HL6U 13.7
GTEX-13G51-2326-SM-5LZXV 13.7
GTEX-13OW8-0426-SM-5J2NR 13.6
GTEX-S95S-1026-SM-4B64M 13.3
GTEX-U8XE-2526-SM-4E3IT 13.3
GTEX-WK11-2626-SM-4OOSK 13.3
GTEX-OOBJ-2026-SM-3NB1R 13.0
GTEX-S3XE-1326-SM-4AD4H 12.9
GTEX-ZVP2-0826-SM-59HJ6 12.8
GTEX-14E6E-1126-SM-5S2R4 12.7
GTEX-QMRM-1426-SM-4R1K8 12.6
GTEX-U3ZM-0926-SM-4DXSW 12.5
GTEX-ZLFU-1726-SM-4WWBU 12.5
GTEX-111CU-1526-SM-5N9FS 12.4
GTEX-YB5E-1826-SM-5IFI4 12.3
GTEX-14ABY-0726-SM-5Q5DF 12.2
GTEX-S4Q7-1026-SM-4AD75 12.2
GTEX-VJYA-1226-SM-3GIJ6 12.1
GTEX-WH7G-1726-SM-4LVKY 12.1
GTEX-13NYS-1026-SM-5KLZT 11.9
GTEX-RWSA-2026-SM-47JX8 11.9
GTEX-11WQK-2726-SM-5EQMU 11.8
GTEX-13111-1326-SM-5GCNO 11.7
GTEX-PLZ6-1126-SM-3P5ZR 11.7
GTEX-132QS-1126-SM-5P9GC 11.6
GTEX-1399T-1226-SM-5P9J5 11.2
GTEX-Q2AI-1126-SM-48U19 11.2
GTEX-11OF3-1726-SM-5GU5Q 11.1
GTEX-13O21-1126-SM-5N9EV 11.1
GTEX-QEG4-2226-SM-4R1JM 11.0
GTEX-QV44-1526-SM-4R1KI 11.0
GTEX-ZTTD-2726-SM-57WFA 11.0
GTEX-14BMV-2326-SM-5RQJ4 10.9
GTEX-146FQ-1726-SM-5QGPX 10.8
GTEX-XQ3S-2526-SM-4BOOG 10.8
GTEX-11O72-2726-SM-5HL6K 10.7
GTEX-QV31-1026-SM-4R1K3 10.7
GTEX-WFG7-1826-SM-3GIL1 10.7
GTEX-WFG8-1826-SM-4LVM4 10.7
GTEX-111FC-2026-SM-5GZYO 10.6
GTEX-148VJ-1826-SM-5Q5DV 10.6
GTEX-SNOS-1026-SM-4DM4Y 10.5
GTEX-12ZZZ-2026-SM-5LZWJ 10.3
GTEX-Y9LG-1826-SM-4VBQC 10.3
GTEX-ZDYS-1226-SM-5IJF3 10.3
GTEX-ZT9W-1626-SM-4YCDQ 10.1
GTEX-117YX-1526-SM-5H12T 9.7
GTEX-11DYG-2526-SM-5N9BB 9.5
GTEX-11TT1-2026-SM-5EQM8 9.5
GTEX-ZTX8-1026-SM-5EGHD 9.5
GTEX-11P7K-0626-SM-5985Z 9.4
GTEX-139T6-1526-SM-5P9G6 9.4
GTEX-Y8E4-2126-SM-5RQHO 9.2
GTEX-12C56-1326-SM-5FQSV 8.8
GTEX-U4B1-1426-SM-4DXTX 8.8
GTEX-11NSD-0826-SM-5986S 8.7
GTEX-SJXC-2026-SM-4DM6N 8.7
GTEX-OIZH-2026-SM-3NB1M 8.6
GTEX-XOTO-2826-SM-4B65I 8.5
GTEX-1399R-0526-SM-5IJEF 8.4
GTEX-WFON-1626-SM-4LVMV 8.4
GTEX-XMK1-1026-SM-4B65H 8.4
GTEX-ZZ64-0926-SM-5E44L 8.3
GTEX-13FTW-1226-SM-5LZZ1 8.2
GTEX-X5EB-1826-SM-4E3K8 7.9
GTEX-ZY6K-1526-SM-5GZXE 7.9
GTEX-S33H-1826-SM-4AD65 7.8
GTEX-11P82-1126-SM-5BC5K 7.7
GTEX-V1D1-1926-SM-4JBGX 7.7
GTEX-REY6-2126-SM-48FD9 7.6
GTEX-13FHO-2826-SM-5K7ZA 7.5
GTEX-145LT-0626-SM-5O99E 7.4
GTEX-145LV-1226-SM-5S2QH 7.4
GTEX-YF7O-1926-SM-4W1YQ 7.4
GTEX-ZPU1-2026-SM-57WFI 7.4
GTEX-UTHO-2726-SM-4JBH9 7.2
GTEX-11TUW-2126-SM-5GU7B 7.0
GTEX-117YW-1426-SM-5EGGO 6.9
GTEX-WZTO-0926-SM-4PQZ3 6.8
GTEX-144GM-0826-SM-5O98R 6.7
GTEX-SNMC-0926-SM-4DM5U 6.6
GTEX-132NY-2826-SM-5P9G2 6.4
GTEX-13FXS-2826-SM-5LZYC 6.1
GTEX-WOFM-0326-SM-4OOSL 5.9
GTEX-ZUA1-2826-SM-59HLE 5.5
GTEX-NFK9-2226-SM-3MJGP 4.8
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

31.9

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 31.9
FF:10022-101D4 73,79,93 years, male 31.9

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