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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:26.2RPKM
FANTOM5:62.5Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA004689

 

Antibody HPA008285

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Low  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

26.2

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 26.2
Samples: 94

Max RPKM: 88.1
Min RPKM: 8.1
Std RPKM: 12.8
Median RPKM: 24.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 88.1
GTEX-13QJC-0011-R1b-SM-5S2UU 64.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 61.9
GTEX-13N1W-0011-R1b-SM-5MR4T 57.2
GTEX-13OW5-0011-R1b-SM-5L3GE 53.9
GTEX-13S7M-0011-R1b-SM-5PNZE 49.2
GTEX-13OVL-0011-R1a-SM-5L3H5 48.3
GTEX-13G51-0011-R1a-SM-5LZYR 47.8
GTEX-P44H-0011-R1A-SM-3NM8J 43.1
GTEX-13JVG-0011-R1a-SM-5KM32 40.1
GTEX-12WSB-0011-R1b-SM-5P9EY 39.9
GTEX-13NZA-0011-R1b-SM-5LUAF 36.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 36.4
GTEX-13JUV-0011-R1a-SM-5LZY4 35.7
GTEX-WZTO-0011-R1B-SM-3NMAR 35.6
GTEX-1212Z-0011-R1b-SM-5BC72 35.0
GTEX-11GSO-0011-R1b-SM-57WD3 34.7
GTEX-XMD1-0011-R1A-SM-4AT4C 33.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 32.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 32.0
GTEX-12WSM-0011-R1a-SM-5LZW6 31.1
GTEX-XOTO-0011-R1B-SM-4B65C 31.0
GTEX-13N2G-0011-R1b-SM-5MR3G 30.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 30.1
GTEX-131XH-0011-R1a-SM-5DUWA 29.7
GTEX-QVUS-0011-R1A-SM-3GAD2 29.4
GTEX-N7MT-0011-R1a-SM-5SI7S 29.3
GTEX-11UD1-0011-R1b-SM-5BC7D 28.7
GTEX-145LS-0011-R1b-SM-5PNUP 28.4
GTEX-139TT-0011-R1a-SM-5LZVD 28.3
GTEX-13O3O-0011-R1b-SM-5KM2K 27.9
GTEX-13OW7-0011-R1b-SM-5L3HF 27.5
GTEX-14ASI-0011-R1b-SM-5S2TY 26.9
GTEX-N7MS-0011-R1a-SM-2HMJG 26.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 26.7
GTEX-13SLW-0011-R1a-SM-5S2W7 26.5
GTEX-13FXS-0011-R1a-SM-5K7U6 26.5
GTEX-132Q8-0011-R1a-SM-5EGLK 26.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 26.3
GTEX-13X6I-0011-R1b-SM-5PNZC 26.1
GTEX-WVLH-0011-R1A-SM-4MVOK 25.8
GTEX-YFC4-0011-R1a-SM-4V6EH 25.4
GTEX-NPJ7-0011-R1a-SM-3GACT 25.3
GTEX-WL46-0011-R1A-SM-3LK6M 25.2
GTEX-11ONC-0011-R1a-SM-57WD4 25.1
GTEX-12WSD-0011-R1b-SM-5LZVY 24.9
GTEX-T6MN-0011-R1A-SM-32QOY 24.9
GTEX-S7SE-0011-R1A-SM-2XCDE 24.4
GTEX-X4XX-0011-R1B-SM-3P622 24.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 24.0
GTEX-12WSF-0011-R1a-SM-5DUVI 23.0
GTEX-QMR6-0011-R1A-SM-32PKW 22.5
GTEX-13FHO-0011-R1b-SM-5KLZG 22.2
GTEX-QVJO-0011-R1A-SM-2S1QI 21.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 21.6
GTEX-12WSE-0011-R1b-SM-5GU4V 21.6
GTEX-T5JC-0011-R1A-SM-32PM6 21.5
GTEX-13112-0011-R1b-SM-5HL7K 20.8
GTEX-PVOW-0011-R1A-SM-32PL6 20.7
GTEX-QDT8-0011-R1A-SM-32PKS 19.9
GTEX-UTHO-0011-R1A-SM-3GIJO 19.8
GTEX-R55E-0011-R1A-SM-2TC6N 19.6
GTEX-11ZTS-0011-R1a-SM-5BC71 19.6
GTEX-131YS-0011-R1a-SM-5DUXC 19.0
GTEX-RNOR-0011-R1A-SM-5SI8F 18.9
GTEX-13NYS-0011-R1b-SM-5MR55 18.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 18.6
GTEX-13OW8-0011-R1a-SM-5L3HI 18.5
GTEX-X585-0011-R1B-SM-46MVE 18.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 18.1
GTEX-13FLW-0011-R1b-SM-5LZX2 17.6
GTEX-NPJ8-0011-R1a-SM-33HCB 17.1
GTEX-13CF2-0011-R1a-SM-5LZY1 16.9
GTEX-1313W-0011-R1b-SM-5EQ4A 16.6
GTEX-WWYW-0011-R1A-SM-3TW8G 16.4
GTEX-TSE9-0011-R1A-SM-3DB7E 16.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 16.2
GTEX-12WSH-0011-R1a-SM-5GU5V 16.0
GTEX-13NYB-0011-R1b-SM-5KM4F 16.0
GTEX-145MH-0011-R1b-SM-5PNWY 15.9
GTEX-1399T-0011-R1b-SM-5DUWN 15.3
GTEX-139T8-0011-R1a-SM-5HL75 14.9
GTEX-YJ89-0011-R1a-SM-4RGLS 14.8
GTEX-144GL-0011-R1a-SM-5PNZ5 14.5
GTEX-145LU-0011-R1a-SM-5Q5CE 13.8
GTEX-144GO-0011-R1a-SM-5PNWO 13.8
GTEX-13PDP-0011-R1a-SM-5PNX5 13.7
GTEX-PWO3-0011-R1A-SM-2I5EW 13.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 13.5
GTEX-13FHP-0011-R1b-SM-5K7XL 13.1
GTEX-13FTY-0011-R1a-SM-5LZXE 10.2
GTEX-ZE7O-0011-R1a-SM-57WDM 8.7
GTEX-ZF28-0011-R1a-SM-4WWD1 8.6
GTEX-NL3H-0011-R1a-SM-48TDJ 8.1
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

62.5

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 62.5
FF:10153-102I9 76 years, female 94.0
FF:10169-103B7 60 years, female 50.1
FF:10374-105G5 89 years, female 43.3

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