Cell atlas - CABP4 - The Human Protein Atlas

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CABP4

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	CABP4
Gene description	Calcium binding protein 4
Protein class	Disease related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Cell line enhanced (HMC-1, CAPAN-2)
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enhanced (HMC-1, CAPAN-2) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	CABP4 (HGNC Symbol)
Synonyms	CSNB2B
Description	Calcium binding protein 4 (HGNC Symbol)
Entrez gene summary	This gene encodes a member of the CABP family of calcium binding protein characterized by four EF-hand motifs. Mutations in this gene are associated with congenital stationary night blindness type 2B. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jul 2014]
Chromosome	11
Cytoband	q13.2
Chromosome location (bp)	67452406 - 67460313
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000175544 (version 83.38)
Entrez gene	57010
UniProt	P57796 (UniProt - Evidence at protein level)
neXtProt	NX_P57796
Antibodypedia	CABP4 antibodies

PROTEIN BROWSER

CABP4-001	CABP4-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CABP4-001 ENSP00000324960 ENST00000325656	P57796 [Direct mapping] Calcium-binding protein 4 Show all	Predicted intracellular proteins Disease related genes Protein evidence (Kim et al 2014) Show all	GO:0005509 [calcium ion binding] GO:0005576 [extracellular region] GO:0005829 [cytosol] GO:0007165 [signal transduction] GO:0007601 [visual perception] GO:0007602 [phototransduction] GO:0008594 [photoreceptor cell morphogenesis] GO:0043195 [terminal bouton] GO:0045202 [synapse] GO:0046549 [retinal cone cell development] GO:0060040 [retinal bipolar neuron differentiation] Show all	275 aa 30.4 kDa	No	0
CABP4-002 ENSP00000401555 ENST00000438189	P57796 [Direct mapping] Calcium-binding protein 4 A0A024R5K4 [Target identity:100%; Query identity:100%] Calcium binding protein 4, isoform CRA_b Show all	Predicted intracellular proteins Disease related genes Show all	GO:0005509 [calcium ion binding] GO:0005576 [extracellular region] GO:0005829 [cytosol] GO:0007165 [signal transduction] GO:0007601 [visual perception] GO:0043195 [terminal bouton] GO:0045202 [synapse] Show all	170 aa 19.6 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.