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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:172.5TPM
GTEx:27.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA002265

 

Antibody CAB017621

 

Endothelial cells

High   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

172.5

N/A Male, age 5
Sample 1
TPM: 142.0
overview Female, age 40
Sample 2
TPM: 138.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 237.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

27.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 25.3
Samples: 114

Max RPKM: 62.1
Min RPKM: 7.2
Std RPKM: 10.8
Median RPKM: 23.4
GTEX-PWO3-0926-SM-2I5EY 62.1
GTEX-NPJ8-1526-SM-2D7VU 55.0
GTEX-QVJO-1426-SM-2S1QY 52.9
GTEX-13JVG-3126-SM-5L3FH 46.3
GTEX-WZTO-2926-SM-3NM9I 44.9
GTEX-13X6K-2926-SM-5Q5D5 44.5
GTEX-NPJ7-2726-SM-2I3FT 44.5
GTEX-132Q8-3026-SM-5PNVG 43.0
GTEX-1399T-3026-SM-5KLZC 41.3
GTEX-13OVJ-2826-SM-5L3GW 41.3
GTEX-11O72-2926-SM-5BC4V 40.2
GTEX-12WSD-3126-SM-5HL7P 39.1
GTEX-11EI6-3026-SM-5GZZO 38.7
GTEX-12ZZZ-3026-SM-5BC67 38.6
GTEX-139T8-1026-SM-5J2MC 38.6
GTEX-145LS-3126-SM-5Q5BY 38.4
GTEX-144FL-3026-SM-5O99C 38.1
GTEX-QVUS-2826-SM-3GADB 38.0
GTEX-N7MT-1126-SM-5SI7V 36.2
GTEX-13IVO-2926-SM-5L3CZ 35.6
GTEX-ZAK1-3026-SM-5S2MJ 35.1
GTEX-QMR6-1426-SM-32PLA 34.4
GTEX-1192X-3126-SM-5N9BY 34.2
GTEX-11DXY-3226-SM-5GIDE 33.5
GTEX-13S7M-3126-SM-5RQJQ 33.4
GTEX-13QIC-2926-SM-5J2NF 33.3
GTEX-Q2AG-2926-SM-2HMJ3 33.3
GTEX-ZVT3-3026-SM-5E43N 33.2
GTEX-11ONC-2926-SM-5P9JM 32.8
GTEX-12WSA-2926-SM-5EQ4D 31.3
GTEX-13OW7-3026-SM-5L3GY 31.3
GTEX-131YS-3126-SM-5KLYT 31.1
GTEX-Y8DK-0826-SM-4TT3T 30.8
GTEX-11TTK-2926-SM-5PNYP 29.9
GTEX-ZUA1-3026-SM-59HJC 29.9
GTEX-11NUK-2926-SM-5A5MD 29.7
GTEX-11GSP-3226-SM-5986O 29.6
GTEX-13JUV-2926-SM-5LZX7 29.4
GTEX-11GSO-2926-SM-5HL73 29.3
GTEX-11EMC-3226-SM-5EGKW 29.1
GTEX-117XS-3026-SM-5N9CA 28.8
GTEX-1445S-3026-SM-5O9BR 28.7
GTEX-RU72-3026-SM-5SI7Y 27.8
GTEX-12WSC-3026-SM-5GCNF 27.7
GTEX-14BMV-3026-SM-5S2PQ 27.0
GTEX-11NV4-2126-SM-5N9DS 26.9
GTEX-11PRG-2926-SM-5987A 26.7
GTEX-13O3Q-2926-SM-5KM45 26.6
GTEX-PVOW-2526-SM-2XCF7 26.3
GTEX-13VXU-2926-SM-5LU5C 26.1
GTEX-WL46-2926-SM-3LK82 26.1
GTEX-145MH-3026-SM-5Q5DZ 25.2
GTEX-OXRN-2426-SM-2I5EQ 24.7
GTEX-11WQK-3026-SM-5EQL6 24.6
GTEX-T2IS-3026-SM-32QPM 24.3
GTEX-X585-3026-SM-46MWF 24.0
GTEX-T6MN-2626-SM-32PMQ 23.5
GTEX-ZZPT-3026-SM-5GZXH 23.3
GTEX-13PL6-3126-SM-5LUAR 23.0
GTEX-12126-1026-SM-5P9JJ 22.7
GTEX-12WSH-3026-SM-5CVNI 22.7
GTEX-RNOR-2326-SM-2TF4I 22.7
GTEX-QDT8-2926-SM-32PKC 22.4
GTEX-131XW-3126-SM-5LZUC 21.6
GTEX-13NYC-2826-SM-5K7WR 21.4
GTEX-13X6J-3026-SM-5Q5CU 21.2
GTEX-Y111-2726-SM-4TT3N 21.2
GTEX-11OC5-0726-SM-5P9JK 21.0
GTEX-X4XX-3026-SM-3NMB2 20.9
GTEX-XLM4-3026-SM-4AT6L 20.7
GTEX-13PVQ-3026-SM-5SI93 20.4
GTEX-144GL-3026-SM-5Q5CW 20.2
GTEX-13FHO-3026-SM-5J1O9 20.1
GTEX-11ZUS-2926-SM-5FQSL 19.7
GTEX-13OW6-3026-SM-5J2MI 19.7
GTEX-12ZZY-3026-SM-5GCOU 19.1
GTEX-UTHO-3026-SM-3GAFB 19.1
GTEX-12ZZX-2926-SM-5GCOQ 18.6
GTEX-WVLH-3026-SM-3MJG9 18.6
GTEX-ZE7O-3126-SM-5HL5X 18.1
GTEX-111FC-3126-SM-5GZZ2 17.8
GTEX-YFC4-3126-SM-5PNV6 17.8
GTEX-1128S-2726-SM-5H12C 17.7
GTEX-Z93S-2926-SM-57WB9 17.7
GTEX-13NYB-3026-SM-5IJD7 17.5
GTEX-ZAJG-3126-SM-5HL9J 17.5
GTEX-12ZZW-2926-SM-5LZUP 17.4
GTEX-13FXS-3126-SM-5J2NN 17.3
GTEX-13NYS-3126-SM-5KLYV 16.8
GTEX-145MF-2726-SM-5O995 16.7
GTEX-11GS4-3126-SM-5A5LH 16.0
GTEX-13FLW-1426-SM-5K7YE 15.8
GTEX-13SLX-3126-SM-5S2Q5 15.7
GTEX-13FHP-3026-SM-5IJBS 15.5
GTEX-13OW8-2826-SM-5L3GC 15.3
GTEX-14ASI-3026-SM-5S2PN 15.0
GTEX-145MG-3026-SM-5RQJA 14.8
GTEX-1313W-3126-SM-5LZUI 13.9
GTEX-13G51-3026-SM-5IJB8 13.1
GTEX-WWYW-3126-SM-3NB39 12.6
GTEX-14A5I-2926-SM-5Q5CQ 12.2
GTEX-13OVH-3026-SM-5MR4N 12.1
GTEX-13O3O-3126-SM-5KM3H 11.9
GTEX-11DXW-1126-SM-5H12Q 11.8
GTEX-147GR-3026-SM-5S2ML 10.8
GTEX-YJ89-3026-SM-5IFJI 10.8
GTEX-1117F-3226-SM-5N9CT 10.4
GTEX-XOTO-3026-SM-4B65M 10.2
GTEX-WHSE-3026-SM-3P5ZH 10.1
GTEX-11OF3-2926-SM-5HL78 9.9
GTEX-TSE9-3026-SM-3DB76 9.1
GTEX-T5JC-2426-SM-3NMDB 8.3
GTEX-ZYFD-3026-SM-5E44C 7.7
GTEX-R55F-1326-SM-5S2V4 7.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 28.9
Samples: 108

Max RPKM: 143.5
Min RPKM: 7.7
Std RPKM: 17.8
Median RPKM: 25.5
GTEX-11ZUS-0011-R10b-SM-5BC79 143.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 86.3
GTEX-QVUS-0011-R10A-SM-3GIK3 73.3
GTEX-NL4W-0011-R10A-SM-2I3DY 67.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 61.6
GTEX-N7MT-0011-R10A-SM-2I3E1 56.8
GTEX-QMR6-0011-R10A-SM-32PKO 56.7
GTEX-13X6I-0011-R10a-SM-5PNWI 52.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 51.6
GTEX-13NZA-0011-R10b-SM-5KM54 48.9
GTEX-XMD1-0011-R10A-SM-4AT4A 45.4
GTEX-13G51-0011-R10b-SM-5LZYF 45.3
GTEX-131YS-0011-R10b-SM-5EQ5N 45.1
GTEX-ZUA1-0011-R10a-SM-51MT6 43.0
GTEX-N7MS-0011-R10A-SM-2HMJK 42.4
GTEX-13N2G-0011-R10a-SM-5MR34 41.2
GTEX-WL46-0011-R10A-SM-3MJFQ 39.7
GTEX-OXRO-0011-R10A-SM-2I5EH 38.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 38.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 38.3
GTEX-XLM4-0011-R10A-SM-4AT5P 38.3
GTEX-ZV68-0011-R10a-SM-51MT7 37.7
GTEX-145LS-0011-R10a-SM-5PNUQ 37.6
GTEX-P44H-0011-R10A-SM-2XCEK 37.6
GTEX-X261-0011-R10B-SM-4E3JT 35.3
GTEX-12WSA-0011-R10b-SM-5P9ET 35.2
GTEX-13X6K-0011-R10a-SM-5P9JR 34.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 34.0
GTEX-13QIC-0011-R10a-SM-5O9C7 33.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 33.4
GTEX-13OVL-0011-R10a-SM-5L3GS 31.9
GTEX-13SLW-0011-R10a-SM-5S2UI 31.3
GTEX-13NYB-0011-R10a-SM-5KM43 30.7
GTEX-12WSC-0011-R10a-SM-5GU57 30.6
GTEX-13FHO-0011-R10b-SM-5J2MM 30.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 30.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 29.7
GTEX-13IVO-0011-R10a-SM-5LZY3 29.2
GTEX-11H98-0011-R10b-SM-5NQ98 29.0
GTEX-S7SE-0011-R10A-SM-2XCDF 28.9
GTEX-145MH-0011-R10b-SM-5PNUK 28.7
GTEX-1445S-0011-R10a-SM-5PNWB 28.6
GTEX-T6MN-0011-R10A-SM-32QP7 27.9
GTEX-13JUV-0011-R10b-SM-5LZXR 27.5
GTEX-OXRN-0011-R10A-SM-2I5GC 27.3
GTEX-11WQK-0011-R10a-SM-5BC6R 26.5
GTEX-13QJC-0011-R10a-SM-5SI63 26.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 26.3
GTEX-QDT8-0011-R10A-SM-32PKG 26.2
GTEX-X585-0011-R10A-SM-46MUY 26.1
GTEX-13S7M-0011-R10b-SM-5PNZB 25.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 25.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 25.9
GTEX-X4XX-0011-R10B-SM-46MWO 25.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 25.3
GTEX-145LU-0011-R10a-SM-5PNWJ 25.3
GTEX-1477Z-0011-R10b-SM-5S2RF 25.0
GTEX-13OW6-0011-R10a-SM-5L3HE 24.7
GTEX-13O3Q-0011-R10b-SM-5KM39 24.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 24.5
GTEX-ZVT3-0011-R10b-SM-57WB6 24.3
GTEX-WZTO-0011-R10B-SM-4E3KB 24.0
GTEX-12WSF-0011-R10a-SM-5LZVH 23.9
GTEX-131XW-0011-R10a-SM-5DUVA 23.7
GTEX-11WQC-0011-R10a-SM-57WCT 22.8
GTEX-RVPU-0011-R10A-SM-2XCAH 22.8
GTEX-13SLX-0011-R10a-SM-5P9HV 22.3
GTEX-13JVG-0011-R10b-SM-5KM2P 22.2
GTEX-13OW7-0011-R10a-SM-5L3H3 22.2
GTEX-13OW8-0011-R10a-SM-5L3H6 22.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 22.0
GTEX-14BIL-0011-R10a-SM-5SI75 21.4
GTEX-T5JC-0011-R10A-SM-32PM2 21.3
GTEX-YFC4-0011-R10a-SM-4SOK5 21.1
GTEX-1313W-0011-R10b-SM-5DUXA 20.9
GTEX-13X6J-0011-R10b-SM-5PNWA 20.8
GTEX-13FLW-0011-R10b-SM-5LZZF 20.6
GTEX-13FXS-0011-R10a-SM-5J2MA 20.1
GTEX-WVLH-0011-R10A-SM-3MJFM 20.0
GTEX-12WSH-0011-R10a-SM-5LZUS 19.9
GTEX-TSE9-0011-R10A-SM-3DB7O 19.7
GTEX-NL3H-0011-R10A-SM-2I3E9 19.3
GTEX-ZF28-0011-R10a-SM-4WWEH 19.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 18.9
GTEX-147GR-0011-R10b-SM-5S2UM 18.5
GTEX-145MG-0011-R10a-SM-5PNWG 16.9
GTEX-12126-0011-R10b-SM-5BC6T 16.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 16.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 16.0
GTEX-13O3O-0011-R10a-SM-5LUA9 15.4
GTEX-14753-0011-R10b-SM-5S2WE 15.3
GTEX-13NYS-0011-R10a-SM-5MR4S 14.6
GTEX-ZXG5-0011-R10a-SM-57WDD 14.6
GTEX-X4EP-0011-R10B-SM-4QASJ 14.2
GTEX-14BIN-0011-R10a-SM-5S2UA 12.9
GTEX-147F4-0011-R10b-SM-5S2WC 12.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 12.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 12.0
GTEX-13CZV-0011-R10b-SM-5LZYD 11.5
GTEX-YJ89-0011-R10a-SM-4SOK9 11.5
GTEX-12WSM-0011-R10a-SM-5DUWV 11.2
GTEX-Z93S-0011-R10a-SM-4RGNM 10.4
GTEX-12WSE-0011-R10b-SM-5P9JV 10.0
GTEX-WWYW-0011-R10A-SM-3NB35 9.6
GTEX-13N1W-0011-R10b-SM-5MR4H 8.2
GTEX-131XH-0011-R10a-SM-5EGLJ 7.8
GTEX-139TS-0011-R10a-SM-5K7TU 7.8
GTEX-12WSD-0011-R10b-SM-5GU79 7.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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