Expression of SMIM19 in cancer - Summary

CANCER ATLAS

Gene description

Small integral membrane protein 19

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA011145

GENE INFORMATION
Gene name	SMIM19 (HGNC Symbol)
Synonyms	C8orf40
Description	Small integral membrane protein 19 (HGNC Symbol)
Entrez gene summary
Chromosome	8
Cytoband	p11.21
Chromosome location (bp)	42541155 - 42555193
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000176209 (version 83.38)
Entrez gene	114926
UniProt	Q96E16 (UniProt - Inferred from homology)
neXtProt	NX_Q96E16
Antibodypedia	SMIM19 antibodies

PROTEIN BROWSER

SMIM19-001	SMIM19-002	SMIM19-003	SMIM19-004	SMIM19-006	SMIM19-007

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SMIM19-001 ENSP00000405694 ENST00000417410	Q96E16 [Direct mapping] Small integral membrane protein 19 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	107 aa 12.4 kDa	No	1
SMIM19-002 ENSP00000408997 ENST00000414154	Q96E16 [Direct mapping] Small integral membrane protein 19 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	107 aa 12.4 kDa	No	1
SMIM19-003 ENSP00000390750 ENST00000416469	Q96E16 [Direct mapping] Small integral membrane protein 19 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	107 aa 12.4 kDa	No	1
SMIM19-004 ENSP00000391549 ENST00000438528	Q96E16 [Direct mapping] Small integral membrane protein 19 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	107 aa 12.4 kDa	No	1
SMIM19-006 ENSP00000430387 ENST00000518574	E5RKA7 [Direct mapping] Small integral membrane protein 19 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		36 aa 4.3 kDa	No	0
SMIM19-007 ENSP00000429586 ENST00000490331	Q96E16 [Direct mapping] Small integral membrane protein 19 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	107 aa 12.4 kDa	No	1