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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.9TPM
GTEx:34.0RPKM
FANTOM5:44.7Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Low
 

Antibody staining

Antibody HPA021282

 

Antibody CAB025541

 

Squamous epithelial cells

Low   Not detected  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

24.9

overview Female, age 70
Sample 1
TPM: 35.3
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 18.3
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 21.1
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

34.0

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 34.0
Samples: 286

Max RPKM: 76.3
Min RPKM: 15.4
Std RPKM: 10.9
Median RPKM: 32
GTEX-R45C-1226-SM-48FEE 76.3
GTEX-ZZPT-1426-SM-5N9C5 72.7
GTEX-13OVJ-1226-SM-5L3HA 71.2
GTEX-12ZZW-1726-SM-5DUVD 70.3
GTEX-X585-1226-SM-46MW7 67.3
GTEX-11DZ1-2026-SM-5A5KG 65.7
GTEX-13PVQ-1726-SM-5IFF3 63.1
GTEX-11DYG-1326-SM-5N9DO 61.3
GTEX-XLM4-2326-SM-4TT2D 61.1
GTEX-132Q8-1826-SM-5EGIY 61.0
GTEX-TSE9-1226-SM-4DXTM 60.3
GTEX-144FL-2726-SM-5O98Z 60.1
GTEX-QVUS-0626-SM-447CC 55.8
GTEX-13X6I-1026-SM-5LU4C 55.6
GTEX-139UW-1126-SM-5IJEJ 54.7
GTEX-R55D-1126-SM-48FEB 54.5
GTEX-ZYW4-1326-SM-5E45N 54.3
GTEX-144GO-2726-SM-5O9A2 54.1
GTEX-145LS-1826-SM-5LUAZ 53.1
GTEX-Y111-1626-SM-57WCY 53.1
GTEX-11TUW-1326-SM-5EQKV 52.9
GTEX-ZVE2-1326-SM-5NQ94 52.7
GTEX-139TU-1226-SM-5J2NL 52.2
GTEX-12WSA-1426-SM-5EGJU 51.9
GTEX-OXRP-0926-SM-48TC1 49.6
GTEX-RNOR-1226-SM-48FDQ 49.3
GTEX-R55E-1326-SM-48FCR 48.7
GTEX-11NUK-1326-SM-5P9GN 48.0
GTEX-XMD2-1326-SM-4YCET 47.8
GTEX-ZF3C-1626-SM-4WWB4 47.7
GTEX-RN64-1026-SM-48FDX 47.5
GTEX-RVPV-0526-SM-47JYL 46.9
GTEX-145MO-1426-SM-5Q5BS 46.8
GTEX-UPK5-1226-SM-4IHL8 46.8
GTEX-148VJ-1026-SM-5LU98 46.7
GTEX-13OW8-2326-SM-5L3I9 46.4
GTEX-WK11-1026-SM-4OOS8 46.4
GTEX-ZAB4-1126-SM-5HL86 46.0
GTEX-145MF-1426-SM-5O9B6 45.4
GTEX-N7MT-0326-SM-48TDP 45.3
GTEX-X62O-2226-SM-46MW3 45.3
GTEX-RUSQ-0826-SM-47JWW 45.1
GTEX-13FHO-1726-SM-5IFGM 44.8
GTEX-13O1R-1326-SM-5IJF5 44.8
GTEX-T2IS-0826-SM-4DM6L 44.5
GTEX-P4PP-0626-SM-3NM9X 44.4
GTEX-QEG4-0726-SM-4R1JL 44.2
GTEX-XK95-1026-SM-4GIDV 44.2
GTEX-YECK-1626-SM-5IFHQ 44.2
GTEX-13W46-1926-SM-5J2MF 43.8
GTEX-P78B-1026-SM-3NMC4 43.6
GTEX-NPJ8-1926-SM-3MJGB 43.3
GTEX-XOTO-2126-SM-4B64U 43.2
GTEX-PSDG-1326-SM-48TD2 43.1
GTEX-SNOS-0626-SM-4DM5F 43.0
GTEX-11ZU8-1526-SM-5EGHX 42.9
GTEX-UJMC-0926-SM-4IHLK 42.9
GTEX-13G51-0926-SM-5IFFU 42.3
GTEX-WQUQ-1626-SM-4OOSH 42.2
GTEX-UPIC-1026-SM-4IHLT 41.8
GTEX-XQ3S-1126-SM-4BOPK 41.8
GTEX-RTLS-1126-SM-46MUQ 41.3
GTEX-1212Z-2126-SM-5FQTM 41.2
GTEX-13O3Q-0826-SM-5IFGF 40.8
GTEX-OXRL-0626-SM-3NM9C 40.5
GTEX-1399Q-1126-SM-5P9JA 40.1
GTEX-REY6-1326-SM-48FDO 40.1
GTEX-S7SF-0926-SM-4AD4M 40.0
GTEX-RU72-0726-SM-46MUW 39.9
GTEX-QDVN-1026-SM-48TZA 39.8
GTEX-T5JC-1726-SM-4DM6U 39.6
GTEX-11VI4-0526-SM-5EQ48 39.5
GTEX-WVLH-1426-SM-4MVNX 39.2
GTEX-X4LF-0626-SM-4QASB 38.8
GTEX-ZYY3-1526-SM-5SIA9 38.8
GTEX-11GSP-1826-SM-5N9DQ 38.4
GTEX-14C38-2126-SM-5RQJO 38.4
GTEX-P4QS-0626-SM-3NMD1 38.3
GTEX-146FQ-1026-SM-5LU8I 38.0
GTEX-X4EO-1226-SM-4QARR 38.0
GTEX-YJ89-1526-SM-5P9IR 37.7
GTEX-ZYVF-2226-SM-5GIDD 37.7
GTEX-11ZTS-2626-SM-5EGIC 37.4
GTEX-1497J-2726-SM-5SI9W 37.4
GTEX-PVOW-1626-SM-48TC9 37.4
GTEX-WFG7-1126-SM-4LMK3 37.1
GTEX-13QJ3-1726-SM-5RQK9 37.0
GTEX-U8XE-1726-SM-4E3IF 36.9
GTEX-13U4I-1126-SM-5LU3S 36.7
GTEX-QLQW-0526-SM-4R1KS 36.7
GTEX-14BIN-2726-SM-5RQIE 36.6
GTEX-WH7G-0926-SM-4LVMJ 36.6
GTEX-P4QT-0626-SM-3NMCP 36.2
GTEX-ZXES-1126-SM-5GZXN 36.2
GTEX-11EMC-2226-SM-5A5JW 36.1
GTEX-11ONC-1526-SM-5GU6S 36.0
GTEX-UJHI-0826-SM-4IHLM 36.0
GTEX-XV7Q-1126-SM-4BRVS 35.9
GTEX-ZT9X-0526-SM-5GCOP 35.9
GTEX-12696-1326-SM-5FQTJ 35.7
GTEX-NFK9-1126-SM-3LK78 35.7
GTEX-XQ8I-1526-SM-4BOOH 35.5
GTEX-ZYT6-1126-SM-5GZYR 35.5
GTEX-TMMY-1126-SM-4DXSX 35.2
GTEX-WOFM-0626-SM-4OOS3 35.0
GTEX-XUJ4-1026-SM-4BOPB 34.7
GTEX-QEL4-1426-SM-447AC 34.6
GTEX-YFC4-1226-SM-5LU9R 34.6
GTEX-ZE9C-1126-SM-4WWBD 34.6
GTEX-ZPCL-1426-SM-57WEC 34.5
GTEX-QDVJ-0726-SM-48U1W 34.4
GTEX-145ME-0526-SM-5QGQV 34.3
GTEX-1399U-1026-SM-5J1OC 34.1
GTEX-O5YV-1026-SM-3LK72 34.1
GTEX-QLQ7-0926-SM-447BC 34.1
GTEX-ZTX8-0226-SM-5E44D 34.0
GTEX-ZUA1-1226-SM-5NQ6O 34.0
GTEX-144GN-0626-SM-5O9B2 33.9
GTEX-XYKS-1526-SM-4BRUP 33.7
GTEX-XGQ4-1526-SM-4AT6H 33.6
GTEX-S4Q7-0626-SM-4AD5M 33.5
GTEX-R3RS-1326-SM-48FE7 33.4
GTEX-13X6K-2126-SM-5O9D4 33.3
GTEX-S33H-0826-SM-4AD5Y 33.3
GTEX-WFON-0826-SM-4LVMI 33.3
GTEX-13NZB-1226-SM-5J2MW 33.2
GTEX-QEG5-1426-SM-447AS 33.2
GTEX-12KS4-0926-SM-5BC5S 33.1
GTEX-145LV-1326-SM-5S2QI 33.1
GTEX-ZQUD-0426-SM-57WFR 33.0
GTEX-14BMU-0926-SM-5S2QB 32.9
GTEX-U3ZN-1726-SM-4DXUQ 32.7
GTEX-PLZ4-1626-SM-3P618 32.6
GTEX-13W3W-1626-SM-5LU35 32.5
GTEX-Q2AI-0626-SM-48TZU 32.5
GTEX-YF7O-0926-SM-5IFIF 32.5
GTEX-145LT-1126-SM-5LUA1 32.4
GTEX-145MN-1026-SM-5NQ9G 32.4
GTEX-OOBK-0625-SM-3LK5P 32.4
GTEX-13FLV-1126-SM-5J2NO 32.3
GTEX-OIZG-1026-SM-3LK5X 32.3
GTEX-132QS-1426-SM-5P9GE 32.2
GTEX-147F3-0826-SM-5NQA7 32.1
GTEX-X4XY-1726-SM-46MVO 31.9
GTEX-S3XE-0926-SM-4AD4S 31.8
GTEX-SE5C-1226-SM-4BRWV 31.8
GTEX-13CF3-1626-SM-5IFG9 31.7
GTEX-XBED-1026-SM-48TCB 31.7
GTEX-Y8LW-0726-SM-5IFI1 31.6
GTEX-12WSK-1126-SM-5LZV8 31.3
GTEX-U3ZH-1026-SM-4DXUZ 31.2
GTEX-13S86-0826-SM-5SI6J 31.1
GTEX-111CU-0726-SM-5GZYD 30.8
GTEX-12ZZX-1326-SM-5DUWI 30.8
GTEX-VUSG-1226-SM-4KKZF 30.8
GTEX-ZTPG-1626-SM-5DUX2 30.8
GTEX-ZGAY-1126-SM-4WWBS 30.6
GTEX-S95S-0426-SM-4B64I 30.4
GTEX-ZAB5-0926-SM-5CVMV 30.4
GTEX-11XUK-0826-SM-5GU6P 29.9
GTEX-131YS-1426-SM-5IJF7 29.9
GTEX-TML8-1526-SM-4DXUX 29.9
GTEX-144GM-1426-SM-5LU31 29.7
GTEX-U4B1-0826-SM-4DXTW 29.7
GTEX-ZA64-0626-SM-5HL9O 29.7
GTEX-RWS6-0826-SM-47JXF 29.6
GTEX-1211K-0926-SM-5FQTL 29.5
GTEX-S4P3-0426-SM-4AD56 29.4
GTEX-146FH-1726-SM-5QGQ2 29.1
GTEX-ZPU1-1426-SM-4WWFU 29.1
GTEX-V955-1126-SM-4JBH3 29.0
GTEX-ZY6K-0626-SM-59HJL 29.0
GTEX-PWN1-0626-SM-48TDT 28.9
GTEX-13O21-0626-SM-5IJDI 28.8
GTEX-14DAQ-1426-SM-5RQJD 28.7
GTEX-117YW-1926-SM-5H121 28.6
GTEX-131XE-1426-SM-5HL7V 28.6
GTEX-T6MO-0526-SM-4DM6R 28.6
GTEX-OIZI-1426-SM-3NB1T 28.5
GTEX-WEY5-0926-SM-4LMI4 28.4
GTEX-ZZ64-0226-SM-5E44X 28.3
GTEX-S32W-0926-SM-4AD5X 28.2
GTEX-SUCS-0726-SM-4DM7J 28.2
GTEX-XUZC-0426-SM-4BOPE 28.2
GTEX-13QBU-1026-SM-5LU3R 28.1
GTEX-12WSL-1526-SM-5GCP8 27.9
GTEX-X3Y1-1326-SM-4PQZB 27.9
GTEX-XBEW-1326-SM-4AT63 27.9
GTEX-R55C-0826-SM-48FCL 27.8
GTEX-Y5V5-1626-SM-4VDSG 27.8
GTEX-13OVI-2626-SM-5KM4T 27.7
GTEX-Y5V6-1026-SM-4VBS2 27.7
GTEX-S341-0526-SM-4AD5U 27.5
GTEX-T5JW-1326-SM-4DM5G 27.5
GTEX-Y3I4-1226-SM-4TT8N 27.4
GTEX-ZLV1-0526-SM-4WWD4 27.3
GTEX-12WSD-1826-SM-5GCOA 27.1
GTEX-Y9LG-0626-SM-4WWDH 27.1
GTEX-13111-0826-SM-5LZV3 27.0
GTEX-13PVR-1826-SM-5Q5CC 26.9
GTEX-T8EM-0526-SM-4DM64 26.8
GTEX-X15G-0826-SM-4PQZD 26.7
GTEX-R55G-1026-SM-48FDI 26.6
GTEX-P4PQ-0626-SM-3NMCU 26.5
GTEX-RM2N-0726-SM-48FD5 26.5
GTEX-11LCK-1726-SM-5S2OQ 26.4
GTEX-13FH7-0526-SM-5IJF8 26.4
GTEX-14ICL-0526-SM-5RQJ6 26.4
GTEX-PLZ5-0926-SM-3TW8L 26.4
GTEX-Q2AH-0826-SM-48TZN 26.4
GTEX-ZC5H-1326-SM-5HL7E 26.4
GTEX-WRHK-0526-SM-4MVOF 26.2
GTEX-R53T-1126-SM-48FD4 25.9
GTEX-QCQG-0626-SM-48U21 25.8
GTEX-XMK1-1326-SM-4B65Q 25.7
GTEX-ZDYS-0826-SM-4WWCR 25.7
GTEX-WFJO-0826-SM-4LVM5 25.6
GTEX-ZF29-1326-SM-4WWB6 25.5
GTEX-11EM3-0826-SM-5N9CC 25.4
GTEX-12ZZY-1426-SM-5N9EI 25.2
GTEX-Z9EW-0526-SM-5HL8S 25.2
GTEX-QV44-1126-SM-4R1KO 25.1
GTEX-V1D1-1026-SM-4JBHE 25.1
GTEX-PLZ6-0526-SM-3P61C 25.0
GTEX-11DXZ-1226-SM-5H11L 24.9
GTEX-13FTW-1626-SM-5KM4N 24.9
GTEX-ZYWO-1026-SM-5E45U 24.9
GTEX-12BJ1-1626-SM-5HL8Y 24.7
GTEX-RU1J-0326-SM-46MUM 24.7
GTEX-11P82-0526-SM-5986P 24.6
GTEX-QESD-0826-SM-47J4G 24.4
GTEX-VJYA-0726-SM-4KL1T 24.4
GTEX-1122O-1726-SM-5GICM 24.3
GTEX-131XG-1026-SM-5GCMX 24.3
GTEX-139T6-0626-SM-5IFF9 24.3
GTEX-OXRN-1726-SM-3NM9B 24.3
GTEX-ZT9W-1326-SM-51MTB 24.3
GTEX-OIZH-0626-SM-3NB1L 24.2
GTEX-133LE-0626-SM-5IFFJ 24.1
GTEX-14E6E-0726-SM-5S2R3 24.1
GTEX-13X6H-1326-SM-5LU42 24.0
GTEX-SNMC-0526-SM-4DM69 24.0
GTEX-11P81-0826-SM-5P9GR 23.8
GTEX-13OVG-0626-SM-5IFEP 23.8
GTEX-W5WG-1626-SM-4LMKG 23.8
GTEX-ZVT2-1326-SM-5E45H 23.8
GTEX-TKQ1-0326-SM-4DXSM 23.7
GTEX-ZF2S-1226-SM-4WWAX 23.7
GTEX-ZVP2-1326-SM-57WCE 23.7
GTEX-ZG7Y-1126-SM-4WWEZ 23.4
GTEX-11I78-1526-SM-5A5K7 23.3
GTEX-1399S-1326-SM-5P9GH 23.3
GTEX-131XF-0826-SM-5GICG 23.2
GTEX-13RTK-0526-SM-5S2QF 23.2
GTEX-ZTSS-0626-SM-59867 23.2
GTEX-146FR-0426-SM-5SI97 23.1
GTEX-Y8E4-1726-SM-5LU9G 23.1
GTEX-PWCY-0726-SM-48TCS 22.8
GTEX-11DXX-1126-SM-5GZZK 22.7
GTEX-1399R-0826-SM-5IJEL 22.7
GTEX-YB5E-0926-SM-4WWDQ 22.7
GTEX-U3ZM-0526-SM-4DXTB 22.6
GTEX-XXEK-0326-SM-4BRVV 22.6
GTEX-OXRK-1326-SM-3NB1A 22.4
GTEX-12C56-1226-SM-5FQSU 21.9
GTEX-14AS3-0626-SM-5QGQD 21.6
GTEX-Y114-0926-SM-4TT7J 21.6
GTEX-Y3IK-1126-SM-51MSV 21.6
GTEX-13D11-1926-SM-5IFGB 21.5
GTEX-111YS-0926-SM-5EGGI 21.3
GTEX-117YX-1626-SM-5GZZG 21.3
GTEX-WFG8-1226-SM-4V6EI 21.3
GTEX-11EQ9-0726-SM-5A5K2 21.1
GTEX-132AR-2226-SM-5J2NT 20.7
GTEX-Y5LM-1026-SM-4VDSQ 20.6
GTEX-YEC3-2526-SM-4YCDN 20.6
GTEX-11TT1-0526-SM-5P9JO 20.5
GTEX-139YR-1726-SM-5IFFK 20.3
GTEX-11NSD-1126-SM-5N9BQ 19.5
GTEX-14A6H-1326-SM-5NQBC 19.3
GTEX-ZYFG-1126-SM-5GICY 19.1
GTEX-11DXY-1426-SM-5N9CN 18.6
GTEX-13FTX-0526-SM-5IFGS 18.5
GTEX-14E1K-1226-SM-5S2PD 17.0
GTEX-14H4A-1626-SM-5SI69 17.0
GTEX-11P7K-1326-SM-5BC5G 15.4
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

44.7

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 44.7
FF:10015-101C6 68,74,75 years, mixed 44.7

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