Expression of GRAMD1C in cancer - Summary

CANCER ATLAS

Gene description

GRAM domain containing 1C

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Melanoma

STAINING SUMMARY

HPA012316

GENE INFORMATION
Gene name	GRAMD1C (HGNC Symbol)
Synonyms	DKFZp434C0328
Description	GRAM domain containing 1C (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	q13.31
Chromosome location (bp)	113828182 - 113947174
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000178075 (version 83.38)
Entrez gene	54762
UniProt	Q8IYS0 (UniProt - Evidence at protein level)
neXtProt	NX_Q8IYS0
Antibodypedia	GRAMD1C antibodies

PROTEIN BROWSER

GRAMD1C-001	GRAMD1C-005	GRAMD1C-006	GRAMD1C-007	GRAMD1C-011

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
GRAMD1C-001 ENSP00000350881 ENST00000358160	Q8IYS0 [Direct mapping] GRAM domain-containing protein 1C Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	662 aa 76 kDa	No	1
GRAMD1C-005 ENSP00000419132 ENST00000472026	E9PHT3 [Direct mapping] GRAM domain-containing protein 1C Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	495 aa 56.5 kDa	No	1
GRAMD1C-006 ENSP00000408135 ENST00000440446	Q8IYS0 [Direct mapping] GRAM domain-containing protein 1C Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	457 aa 52 kDa	No	1
GRAMD1C-007 ENSP00000418302 ENST00000462838	C9J7B8 [Direct mapping] GRAM domain-containing protein 1C Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	380 aa 43.2 kDa	No	1
GRAMD1C-011 ENSP00000419571 ENST00000488680	C9K0V2 [Direct mapping] GRAM domain-containing protein 1C Show all	MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		44 aa 5.3 kDa	No	0