Tissue expression of C17orf62 - Summary - The Human Protein Atlas

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C17orf62

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	C17orf62
Gene description	Chromosome 17 open reading frame 62
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	22
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in most tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA045696
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

Urinary bladder

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	C17orf62 (HGNC Symbol)
Synonyms	FLJ90469, MGC4368
Description	Chromosome 17 open reading frame 62 (HGNC Symbol)
Entrez gene summary
Chromosome	17
Cytoband	q25.3
Chromosome location (bp)	82442589 - 82450829
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000178927 (version 83.38)
Entrez gene	79415
UniProt	Q9BQA9 (UniProt - Evidence at protein level)
neXtProt	NX_Q9BQA9
Antibodypedia	C17orf62 antibodies

PROTEIN BROWSER

C17orf62-001	C17orf62-003	C17orf62-004	C17orf62-006	C17orf62-010	C17orf62-011	C17orf62-014	C17orf62-015	C17orf62-017	C17orf62-022	C17orf62-024	C17orf62-028	C17orf62-029	C17orf62-030	C17orf62-031	C17orf62-033	C17orf62-034	C17orf62-036	C17orf62-037	C17orf62-038	C17orf62-039	C17orf62-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
C17orf62-001 ENSP00000401626 ENST00000434650	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 Show all	MEMSAT3 predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	173 aa 19.4 kDa	No	0
C17orf62-003 ENSP00000342228 ENST00000342572	H0Y2X1 [Direct mapping] Chromosome 17 open reading frame 62, isoform CRA_c; Uncharacterized protein C17orf62 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		63 aa 6.7 kDa	No	0
C17orf62-004 ENSP00000307765 ENST00000306645	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 A0A024R8W9 [Target identity:100%; Query identity:100%] Chromosome 17 open reading frame 62, isoform CRA_a Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	187 aa 20.8 kDa	No	2
C17orf62-006 ENSP00000388909 ENST00000437807	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 A0A024R8W9 [Target identity:100%; Query identity:100%] Chromosome 17 open reading frame 62, isoform CRA_a Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	187 aa 20.8 kDa	No	2
C17orf62-010 ENSP00000489034 ENST00000581196		SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		63 aa 6.7 kDa	No	0
C17orf62-011 ENSP00000464080 ENST00000578919	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 A0A024R8W9 [Target identity:100%; Query identity:100%] Chromosome 17 open reading frame 62, isoform CRA_a Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	187 aa 20.8 kDa	No	2
C17orf62-014 ENSP00000463846 ENST00000585064	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 A0A024R8W9 [Target identity:100%; Query identity:100%] Chromosome 17 open reading frame 62, isoform CRA_a Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	187 aa 20.8 kDa	No	2
C17orf62-015 ENSP00000462529 ENST00000585080	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 A0A024R8W9 [Target identity:100%; Query identity:100%] Chromosome 17 open reading frame 62, isoform CRA_a Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	187 aa 20.8 kDa	No	2
C17orf62-017 ENSP00000489093 ENST00000584891		SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		18 aa 1.9 kDa	No	0
C17orf62-022 ENSP00000464442 ENST00000577834	J3QRZ2 [Direct mapping] Uncharacterized protein C17orf62 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	118 aa 13.4 kDa	No	2
C17orf62-024 ENSP00000488983 ENST00000584503		SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		63 aa 6.7 kDa	No	0
C17orf62-028 ENSP00000489494 ENST00000580560		SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		63 aa 6.7 kDa	No	0
C17orf62-029 ENSP00000463215 ENST00000577696	J3QKS6 [Direct mapping] Uncharacterized protein C17orf62 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	131 aa 14.9 kDa	No	2
C17orf62-030 ENSP00000463475 ENST00000577471	J3QLB7 [Direct mapping] Uncharacterized protein C17orf62 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	119 aa 13.6 kDa	No	2
C17orf62-031 ENSP00000464531 ENST00000582545	J3QS53 [Direct mapping] Uncharacterized protein C17orf62 Show all	MEMSAT3 predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		85 aa 9.9 kDa	No	0
C17orf62-033 ENSP00000463228 ENST00000577732	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 A0A024R8W9 [Target identity:100%; Query identity:100%] Chromosome 17 open reading frame 62, isoform CRA_a Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	187 aa 20.8 kDa	No	2
C17orf62-034 ENSP00000464633 ENST00000577436	Q9BQA9 [Direct mapping] Uncharacterized protein C17orf62 Show all	MEMSAT3 predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	173 aa 19.4 kDa	No	0
C17orf62-036 ENSP00000464201 ENST00000578913	J3QRG5 [Direct mapping] Uncharacterized protein C17orf62 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	148 aa 16.8 kDa	No	2
C17orf62-037 ENSP00000462515 ENST00000583617	J3KSJ5 [Direct mapping] Uncharacterized protein C17orf62 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	190 aa 21.3 kDa	No	2
C17orf62-038 ENSP00000462956 ENST00000579751	J3KTF4 [Direct mapping] Uncharacterized protein C17orf62 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		88 aa 9.8 kDa	No	0
C17orf62-039 ENSP00000463840 ENST00000582438	J3QQQ4 [Direct mapping] Uncharacterized protein C17orf62 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		59 aa 6.3 kDa	No	0
C17orf62-201 ENSP00000337560 ENST00000336995	F8W8P4 [Direct mapping] Uncharacterized protein C17orf62 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		227 aa 24.9 kDa	No	0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.