Expression of SMCO3 in cancer - Summary

CANCER ATLAS

Gene description

Single-pass membrane protein with coiled-coil domains 3

Protein class

Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Pancreatic cancer

STAINING SUMMARY

HPA040574	HPA047804

GENE INFORMATION
Gene name	SMCO3 (HGNC Symbol)
Synonyms	C12orf69, LOC440087
Description	Single-pass membrane protein with coiled-coil domains 3 (HGNC Symbol)
Entrez gene summary
Chromosome	12
Cytoband	p12.3
Chromosome location (bp)	14804650 - 14814182
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000179256 (version 83.38)
Entrez gene	440087
UniProt	A2RU48 (UniProt - Evidence at protein level)
neXtProt	NX_A2RU48
Antibodypedia	SMCO3 antibodies

PROTEIN BROWSER

SMCO3-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SMCO3-001 ENSP00000381895 ENST00000316048	A2RU48 [Direct mapping] Single-pass membrane and coiled-coil domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	225 aa 24.9 kDa	No	1