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GADD45GIP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.1TPM
GTEx:43.9RPKM
FANTOM5:78.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA065048

  

Endothelial cells

 Low  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

11.1
overview Male, age 54
Sample 1
TPM: 18.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 10.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 13.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 17.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 10.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 10.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 6.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 8.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 7.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 10.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 7.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 12.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 11.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

43.9

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 49.4
Samples: 149

Max RPKM: 82
Min RPKM: 28.6
Std RPKM: 10.4
Median RPKM: 48.6
GTEX-1399U-2226-SM-5KLZI 82.0
GTEX-ZLFU-1426-SM-4WWEU 78.9
GTEX-13O1R-2426-SM-5KLZZ 75.0
GTEX-XAJ8-0726-SM-47JY5 73.2
GTEX-ZE7O-2626-SM-51MSS 72.0
GTEX-ZTTD-2626-SM-57WEX 71.2
GTEX-139TS-2226-SM-5J2N1 69.7
GTEX-X15G-1526-SM-4PQZM 68.0
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 39.7
Samples: 196

Max RPKM: 78.6
Min RPKM: 18.9
Std RPKM: 10.7
Median RPKM: 38.3
GTEX-1399R-2226-SM-5P9JB 78.6
GTEX-XAJ8-0426-SM-47JYJ 78.6
GTEX-QMRM-1226-SM-447C6 74.0
GTEX-XV7Q-2126-SM-4BRVX 67.7
GTEX-WQUQ-2526-SM-4MVNO 63.1
GTEX-13S86-1626-SM-5Q5C5 61.8
GTEX-146FQ-1926-SM-5NQBY 61.2
GTEX-11GSP-1626-SM-5986N 60.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

78.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 78.9
FF:10014-101C5 62,83,84 years, mixed 78.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.