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CDC42EP4
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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:27.6RPKM
FANTOM5:101.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA023335

 

Glial cells

Low  

Neuronal cells

Medium  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

27.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 27.6
Samples: 117

Max RPKM: 48.6
Min RPKM: 6.5
Std RPKM: 7.9
Median RPKM: 27.2
GTEX-12WSB-0011-R5b-SM-5GU67 48.6
GTEX-XMD1-0011-R5A-SM-4AT47 46.9
GTEX-1445S-0011-R5a-SM-5PNUS 46.3
GTEX-144GO-0011-R5a-SM-5PNUR 44.7
GTEX-13OW6-0011-R5a-SM-5O9BK 42.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 41.5
GTEX-13FLV-0011-R5a-SM-5LZWT 40.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 40.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 39.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 39.6
GTEX-11GSP-0011-R5a-SM-57WBE 39.1
GTEX-13JVG-0011-R5a-SM-5MR4O 38.9
GTEX-RU72-0011-R5A-SM-2TF6U 38.9
GTEX-RVPV-0011-R5A-SM-2TF69 38.8
GTEX-ZVT3-0011-R5a-SM-51MSI 37.9
GTEX-13CIG-0011-R5b-SM-5L3F2 37.5
GTEX-13JUV-0011-R5a-SM-5LZY5 36.6
GTEX-T6MN-0011-R5A-SM-32QPD 36.4
GTEX-ZE7O-0011-R5a-SM-57WBO 36.0
GTEX-WVLH-0011-R5A-SM-3MJFW 35.0
GTEX-132Q8-0011-R5a-SM-5IJDM 34.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 34.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 34.0
GTEX-13NYS-0011-R5a-SM-5MR4D 33.1
GTEX-13OW5-0011-R5b-SM-5L3FR 33.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 32.8
GTEX-OHPN-0011-R5A-SM-2I5FF 32.4
GTEX-13NYB-0011-R5a-SM-5MR45 32.2
GTEX-13OW7-0011-R5b-SM-5O9DM 32.0
GTEX-WWYW-0011-R5A-SM-3NB3E 31.9
GTEX-13OVL-0011-R5b-SM-5L3FU 31.8
GTEX-13CZV-0011-R5a-SM-5K7XA 31.7
GTEX-NL4W-0011-R5a-SM-2I3GD 31.6
GTEX-X261-0011-R5A-SM-3NMB4 31.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 31.5
GTEX-T5JC-0011-R5A-SM-32PLK 31.0
GTEX-XOTO-0011-R5A-SM-4B657 30.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 30.4
GTEX-N7MT-0011-R5a-SM-2I3G6 30.2
GTEX-ZUA1-0011-R5b-SM-51MTG 30.1
GTEX-ZV68-0011-R5a-SM-4YCDW 30.1
GTEX-13X6I-0011-R5a-SM-5PNWW 30.0
GTEX-139TS-0011-R5b-SM-5J2MZ 29.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 29.9
GTEX-13O3O-0011-R5b-SM-5KM44 29.3
GTEX-13112-0011-R5b-SM-5DUV8 29.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 29.1
GTEX-13S7M-0011-R5b-SM-5P9HS 29.0
GTEX-14BIN-0011-R5b-SM-5SI78 28.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 28.2
GTEX-13X6K-0011-R5b-SM-5PNUE 28.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 28.0
GTEX-11WQC-0011-R5a-SM-5BC74 27.9
GTEX-12ZZX-0011-R5a-SM-5HL89 27.8
GTEX-131YS-0011-R5b-SM-5K7YB 27.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 27.8
GTEX-139TT-0011-R5b-SM-5K7W8 27.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 27.3
GTEX-11UD1-0011-R5b-SM-5P9FP 27.2
GTEX-13OVH-0011-R5b-SM-5KM4L 27.1
GTEX-13G51-0011-R5a-SM-5L3EB 26.5
GTEX-14BIM-0011-R5b-SM-5S2RM 26.4
GTEX-YFC4-0011-R5a-SM-4RGLR 26.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 26.2
GTEX-OXRN-0011-R5A-SM-2I5EF 26.2
GTEX-S7SE-0011-R5A-SM-2XCDA 25.9
GTEX-ZXG5-0011-R5b-SM-57WBN 25.8
GTEX-139T8-0011-R5b-SM-5J1MO 25.7
GTEX-R55E-0011-R5A-SM-2TC5N 25.3
GTEX-144GL-0011-R5b-SM-5PNUJ 25.2
GTEX-14ABY-0011-R5b-SM-5SI7B 25.0
GTEX-WZTO-0011-R5B-SM-3NMC5 25.0
GTEX-11H98-0011-R5b-SM-57WCF 24.8
GTEX-12WSA-0011-R5b-SM-5GU5I 24.8
GTEX-13FLW-0011-R5a-SM-5LZX6 24.5
GTEX-QVJO-0011-R5A-SM-2S1QM 24.5
GTEX-13NZA-0011-R5b-SM-5KM4K 24.4
GTEX-13CF2-0011-R5a-SM-5LZWS 23.7
GTEX-S7PM-0011-R5A-SM-3NM8G 23.7
GTEX-13VXU-0011-R5a-SM-5O9D7 23.6
GTEX-1477Z-0011-R5b-SM-5PNUO 23.5
GTEX-NL3H-0011-R5a-SM-2I3GB 23.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 23.4
GTEX-13FXS-0011-R5b-SM-5LZYE 23.1
GTEX-YJ89-0011-R5a-SM-4V6GM 23.1
GTEX-11OF3-0011-R5a-SM-57WB4 22.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 22.5
GTEX-13FHP-0011-R5b-SM-5LZY2 22.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 22.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 22.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 22.2
GTEX-13X6J-0011-R5b-SM-5PNWT 22.2
GTEX-X4XX-0011-R5A-SM-46MWN 22.0
GTEX-12WSF-0011-R5a-SM-5HL8K 21.7
GTEX-145LS-0011-R5a-SM-5SI65 21.6
GTEX-12WSD-0011-R5b-SM-5CVNG 21.5
GTEX-N7MS-0011-R5a-SM-2HMK8 20.8
GTEX-145MG-0011-R5b-SM-5S2VU 20.4
GTEX-NPJ7-0011-R5a-SM-33HBK 20.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 19.8
GTEX-1399T-0011-R5b-SM-5IJDK 19.6
GTEX-12WSH-0011-R5b-SM-5P9F3 19.2
GTEX-13SLX-0011-R5a-SM-5O9BV 19.1
GTEX-RVPU-0011-R5A-SM-2XCAD 18.9
GTEX-145MH-0011-R5a-SM-5P9JT 18.7
GTEX-TSE9-0011-R5A-SM-3DB7J 18.1
GTEX-UTHO-0011-R5A-SM-3GIJD 17.9
GTEX-12WSC-0011-R5b-SM-5CVNS 17.7
GTEX-11NV4-0011-R5a-SM-5NQ88 17.1
GTEX-P44H-0011-R5A-SM-2XCEX 17.0
GTEX-QMR6-0011-R5A-SM-32PKT 16.2
GTEX-PVOW-0011-R5A-SM-32PL7 15.5
GTEX-1313W-0011-R5b-SM-5L3EP 15.1
GTEX-WL46-0011-R5A-SM-3LK6V 12.9
GTEX-T2IS-0011-R5A-SM-32QP4 9.7
GTEX-X585-0011-R5A-SM-46MVI 9.7
GTEX-Z93S-0011-R5b-SM-4RGNI 6.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

101.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 101.5
FF:10379-105H1 89 years, female 119.2
FF:10164-103B2 76 years, female 83.8

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