Tissue expression of SOX2 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	118.3	TPM
GTEx:	30.7	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Low
Neuronal cells:	Low
Neuropil:	Not detected

Antibody staining	Antibody CAB010648
Endothelial cells	Not detected
Glial cells	Low
Neuronal cells	Low
Neuropil	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	118.3

Male, age 5

Sample 1
TPM: 82.7

Female, age 40

Sample 2
TPM: 234.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 37.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	30.7

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 30.3

Samples: 114

Max RPKM: 68.1
Min RPKM: 7.1
Std RPKM: 12.4
Median RPKM: 28.3

GTEX-139T8-1026-SM-5J2MC

68.1

GTEX-13IVO-2926-SM-5L3CZ

67.0

GTEX-RU72-3026-SM-5SI7Y

60.4

GTEX-11GSP-3226-SM-5986O

54.3

GTEX-13OW7-3026-SM-5L3GY

53.3

GTEX-13JUV-2926-SM-5LZX7

53.2

GTEX-ZE7O-3126-SM-5HL5X

53.2

GTEX-11EI6-3026-SM-5GZZO

51.9

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 31.0

Samples: 108

Max RPKM: 80.1
Min RPKM: 6
Std RPKM: 15.2
Median RPKM: 29

GTEX-13JUV-0011-R10b-SM-5LZXR

80.1

GTEX-13SLW-0011-R10a-SM-5S2UI

70.0

GTEX-14753-0011-R10b-SM-5S2WE

66.8

GTEX-X4EP-0011-R10B-SM-4QASJ

65.4

GTEX-11WQC-0011-R10a-SM-57WCT

62.8

GTEX-1445S-0011-R10a-SM-5PNWB

59.1

GTEX-1477Z-0011-R10b-SM-5S2RF

58.4

GTEX-13OW8-0011-R10a-SM-5L3H6

57.3

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue