Expression of TNRC18 in cancer - Summary

CANCER ATLAS

Gene description

Trinucleotide repeat containing 18

Protein class

Predicted intracellular proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Pancreatic cancer

STAINING SUMMARY

HPA020730	HPA024251

GENE INFORMATION
Gene name	TNRC18 (HGNC Symbol)
Synonyms	CAGL79, KIAA1856, TNRC18A
Description	Trinucleotide repeat containing 18 (HGNC Symbol)
Entrez gene summary
Chromosome	7
Cytoband	p22.1
Chromosome location (bp)	5306790 - 5425414
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000182095 (version 83.38)
Entrez gene	84629
UniProt	O15417 (UniProt - Evidence at protein level)
neXtProt	NX_O15417
Antibodypedia	TNRC18 antibodies

PROTEIN BROWSER

TNRC18-001	TNRC18-002	TNRC18-007	TNRC18-009	TNRC18-010	TNRC18-013	TNRC18-014	TNRC18-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TNRC18-001 ENSP00000382452 ENST00000399537	H9KVB4 [Direct mapping] Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005677 [chromatin silencing complex] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] GO:0031965 [nuclear membrane] Show all	2968 aa 314.5 kDa	No	0
TNRC18-002 ENSP00000382364 ENST00000399434	A8MTZ4 [Direct mapping] HCG96198, isoform CRA_d; Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005677 [chromatin silencing complex] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] Show all	130 aa 14.1 kDa	No	0
TNRC18-007 ENSP00000329902 ENST00000328270	H7BXS9 [Direct mapping] Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005677 [chromatin silencing complex] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] Show all	407 aa 42.5 kDa	No	0
TNRC18-009 ENSP00000410856 ENST00000434361	C9J9K1 [Direct mapping] Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005677 [chromatin silencing complex] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] Show all	99 aa 10.3 kDa	No	0
TNRC18-010 ENSP00000413911 ENST00000413081	H7C3U5 [Direct mapping] Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005677 [chromatin silencing complex] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] Show all	308 aa 32.4 kDa	No	0
TNRC18-013 ENSP00000398809 ENST00000455076	H7C177 [Direct mapping] Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005677 [chromatin silencing complex] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] Show all	193 aa 20.5 kDa	No	0
TNRC18-014 ENSP00000395990 ENST00000440081	H7C0N9 [Direct mapping] Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005677 [chromatin silencing complex] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] Show all	252 aa 28.2 kDa	No	0
TNRC18-201 ENSP00000395538 ENST00000430969	O15417 [Direct mapping] Trinucleotide repeat-containing gene 18 protein Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000785 [chromatin] GO:0000976 [transcription regulatory region sequence-specific DNA binding] GO:0003682 [chromatin binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005677 [chromatin silencing complex] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0006342 [chromatin silencing] GO:0031507 [heterochromatin assembly] GO:0031965 [nuclear membrane] Show all	2968 aa 314.5 kDa	No	0