Expression of TRAPPC6B in cancer - Summary

CANCER ATLAS

Gene description

Trafficking protein particle complex 6B

Protein class

Predicted intracellular proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA047928

GENE INFORMATION
Gene name	TRAPPC6B
Synonyms
Description	Trafficking protein particle complex 6B (HGNC Symbol)
Entrez gene summary	TRAPPC6B is a component of TRAPP complexes, which are tethering complexes involved in vesicle transport (Kummel et al., 2005 [PubMed 16025134]).[supplied by OMIM, Mar 2008]
Chromosome	14
Cytoband	q21.1
Chromosome location (bp)	39147811 - 39170532
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000182400 (version 83.38)
Entrez gene	122553
UniProt	Q86SZ2 (UniProt - Evidence at protein level)
neXtProt	NX_Q86SZ2
Antibodypedia	TRAPPC6B antibodies

PROTEIN BROWSER

TRAPPC6B-001	TRAPPC6B-002	TRAPPC6B-006

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TRAPPC6B-001 ENSP00000335171 ENST00000347691	Q86SZ2 [Direct mapping] Trafficking protein particle complex subunit 6B Show all	MEMSAT3 predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000139 [Golgi membrane] GO:0005515 [protein binding] GO:0005783 [endoplasmic reticulum] GO:0005829 [cytosol] GO:0006888 [ER to Golgi vesicle-mediated transport] GO:0018279 [protein N-linked glycosylation via asparagine] GO:0043687 [post-translational protein modification] GO:0044267 [cellular protein metabolic process] GO:0048208 [COPII vesicle coating] GO:0061024 [membrane organization] Show all	130 aa 14.8 kDa	No	0
TRAPPC6B-002 ENSP00000330289 ENST00000330149	Q86SZ2 [Direct mapping] Trafficking protein particle complex subunit 6B Show all	MEMSAT3 predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000139 [Golgi membrane] GO:0005515 [protein binding] GO:0005783 [endoplasmic reticulum] GO:0005829 [cytosol] GO:0006888 [ER to Golgi vesicle-mediated transport] GO:0018279 [protein N-linked glycosylation via asparagine] GO:0043687 [post-translational protein modification] GO:0044267 [cellular protein metabolic process] GO:0048208 [COPII vesicle coating] GO:0061024 [membrane organization] Show all	158 aa 18 kDa	No	0
TRAPPC6B-006 ENSP00000450670 ENST00000554018	G3V2H7 [Direct mapping] Trafficking protein particle complex subunit 6B Show all	SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		102 aa 11.7 kDa	No	0