Cell atlas - CLEC4G - The Human Protein Atlas

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CLEC4G

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TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	CLEC4G
Gene description	C-type lectin domain family 4, member G
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	3
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Not detected
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Not detected Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	CLEC4G (HGNC Symbol)
Synonyms	LSECtin, UNQ431
Description	C-type lectin domain family 4, member G (HGNC Symbol)
Entrez gene summary	This gene encodes a glycan-binding receptor and member of the C-type lectin family which plays a role in the T-cell immune response. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]
Chromosome	19
Cytoband	p13.2
Chromosome location (bp)	7728957 - 7733906
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000182566 (version 83.38)
Entrez gene	339390
UniProt	Q6UXB4 (UniProt - Evidence at protein level)
neXtProt	NX_Q6UXB4
Antibodypedia	CLEC4G antibodies

PROTEIN BROWSER

CLEC4G-001	CLEC4G-002	CLEC4G-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CLEC4G-001 ENSP00000327599 ENST00000328853	Q6UXB4 [Direct mapping] C-type lectin domain family 4 member G Q08G24 [Target identity:100%; Query identity:100%] LSECtin Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0001618 [virus receptor activity] GO:0002710 [negative regulation of T cell mediated immunity] GO:0005515 [protein binding] GO:0005886 [plasma membrane] GO:0016021 [integral component of membrane] GO:0030247 [polysaccharide binding] GO:0042130 [negative regulation of T cell proliferation] GO:0046718 [viral entry into host cell] Show all	293 aa 32.6 kDa	No	1
CLEC4G-002 ENSP00000472374 ENST00000599020	M0R277 [Direct mapping] C-type lectin domain family 4 member G Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	149 aa 15.8 kDa	No	1
CLEC4G-201 ENSP00000483109 ENST00000620128	A0A087X056 [Direct mapping] C-type lectin domain family 4 member G Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		252 aa 27.9 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.