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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TCEB3C
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CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

Transcription elongation factor B polypeptide 3C (elongin A3)

Protein class

Plasma proteins, Predicted intracellular proteins

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA048971
HPA049178
HPA050086

Tissue

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Tissue

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

A few renal cancers displayed strong cytoplasmic while a fraction of tumor cells in a few endometrial cancers exhibited moderate granular cytoplasmic positivity. Remaining cancer cells were negative.

Tissue

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Tissue

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

Most cancer tissues showed weak to moderate cytoplasmic staining with additional nuclear positivity in several cases. Several gliomas, lymphomas, melanomas, lung and renal cell carcinomas were negative.

Tissue

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Tissue

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

Most cancer tissues showed weak to moderate nuclear immunoreactivity with additional cytoplasmic positivity in a few cases. Occasional pancreatic cancers were strongly stained. Gliomas, non-Hodgkin's lymphomas, testicular, renal breast and prostate cancers were generally negative.

GENE INFORMATION

Gene name

TCEB3C (HGNC Symbol)

Synonyms

HsT829, TCEB3L2

Description

Transcription elongation factor B polypeptide 3C (elongin A3) (HGNC Symbol)

Entrez gene summary

The SIII (or elongin) transcription elongation factor complex stimulates the rate of transcription elongation by RNA polymerase II by suppressing the transient pausing of the polymerase at many sites along the DNA template. This complex is a heterotrimer, composed of the transcriptionally active subunit A, A2 or A3 (or elongin A, A2 or A3) and two regulatory subunits, B and C (or elongin B and C). This gene encodes subunit A3. A3 and A are ubiquitously expressed, whereas A2 is specifically expressed in the testis. [provided by RefSeq, Mar 2010]

Chromosome

18

Cytoband

q21.1

Chromosome location (bp)

47028202 - 47030078

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000183791 (version 83.38)

Entrez gene

162699

UniProt

Q8NG57 (UniProt - Evidence at protein level)

neXtProt

NX_Q8NG57

Antibodypedia

TCEB3C antibodies

PROTEIN BROWSER

TCEB3C-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TCEB3C-001
ENSP00000328232
ENST00000330682
Q8NG57 [Direct mapping]
RNA polymerase II transcription factor SIII subunit A3
Show all
Predicted intracellular proteins
Plasma proteins
Show all
GO:0003677 [DNA binding]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006368 [transcription elongation from RNA polymerase II promoter]
GO:0016021 [integral component of membrane]
GO:0042787 [protein ubiquitination involved in ubiquitin-dependent protein catabolic process]
GO:0070449 [elongin complex]
Show all
546 aa
59.7 kDa
No 0

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