Tissue expression of CMSS1 - Summary - The Human Protein Atlas

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CMSS1

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	CMSS1
Gene description	Cms1 ribosomal small subunit homolog (yeast)
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic and nucleoli expression in several tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA042820
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	CMSS1 (HGNC Symbol)
Synonyms	C3orf26, MGC4308
Description	Cms1 ribosomal small subunit homolog (yeast) (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	q12.1
Chromosome location (bp)	99817834 - 100178603
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000184220 (version 83.38)
Entrez gene	84319
UniProt	Q9BQ75 (UniProt - Evidence at protein level)
neXtProt	NX_Q9BQ75
Antibodypedia	CMSS1 antibodies

PROTEIN BROWSER

CMSS1-001	CMSS1-003	CMSS1-004	CMSS1-006	CMSS1-008

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CMSS1-001 ENSP00000410396 ENST00000421999	Q9BQ75 [Direct mapping] Protein CMSS1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0044822 [poly(A) RNA binding] Show all	279 aa 31.9 kDa	No	0
CMSS1-003 ENSP00000419161 ENST00000489081	Q9BQ75 [Direct mapping] Protein CMSS1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0044822 [poly(A) RNA binding] Show all	261 aa 30 kDa	No	0
CMSS1-004 ENSP00000418855 ENST00000463526	C9IY68 [Direct mapping] Protein CMSS1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		26 aa 3 kDa	No	0
CMSS1-006 ENSP00000417293 ENST00000478909	C9J384 [Direct mapping] Protein CMSS1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		225 aa 26.2 kDa	No	0
CMSS1-008 ENSP00000418762 ENST00000497345	H7C515 [Direct mapping] Protein CMSS1 Show all	Phobius predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		82 aa 9.5 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.