Tissue expression of PCDH9 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

RNA expression

HPA:	69.0	TPM
GTEx:	12.6	RPKM

CEREBRAL CORTEX - Annotated protein expression
Pending normal tissue analysis

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	69.0

Male, age 5

Sample 1
TPM: 98.2

Female, age 40

Sample 2
TPM: 44.1

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 64.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	12.6

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 10.9

Samples: 114

Max RPKM: 18.8
Min RPKM: 3.3
Std RPKM: 2.2
Median RPKM: 10.8

GTEX-13G51-3026-SM-5IJB8

18.8

GTEX-WHSE-3026-SM-3P5ZH

18.0

GTEX-UTHO-3026-SM-3GAFB

15.7

GTEX-OXRN-2426-SM-2I5EQ

15.6

GTEX-1192X-3126-SM-5N9BY

15.2

GTEX-13IVO-2926-SM-5L3CZ

14.9

GTEX-NPJ8-1526-SM-2D7VU

14.8

GTEX-PVOW-2526-SM-2XCF7

14.7

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 14.4

Samples: 108

Max RPKM: 32.6
Min RPKM: 6.2
Std RPKM: 4.1
Median RPKM: 14

GTEX-QDT8-0011-R10A-SM-32PKG

32.6

GTEX-XMD1-0011-R10A-SM-4AT4A

28.2

GTEX-WWYW-0011-R10A-SM-3NB35

24.5

GTEX-Q2AG-0011-R10A-SM-2HMLA

22.0

GTEX-S7SE-0011-R10A-SM-2XCDF

21.9

GTEX-QVJO-0011-R10A-SM-2S1QJ

21.6

GTEX-WVLH-0011-R10A-SM-3MJFM

20.8

GTEX-ZE7O-0011-R10a-SM-57WAZ

20.1

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue