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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:40.8RPKM
FANTOM5:14.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA031355

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

40.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 40.8
Samples: 117

Max RPKM: 73.9
Min RPKM: 15.4
Std RPKM: 11.5
Median RPKM: 41.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 73.9
GTEX-145MH-0011-R5a-SM-5P9JT 71.0
GTEX-11NV4-0011-R5a-SM-5NQ88 63.3
GTEX-13OVL-0011-R5b-SM-5L3FU 60.7
GTEX-X585-0011-R5A-SM-46MVI 59.1
GTEX-139TT-0011-R5b-SM-5K7W8 58.4
GTEX-T6MN-0011-R5A-SM-32QPD 58.4
GTEX-1399T-0011-R5b-SM-5IJDK 57.9
GTEX-13JUV-0011-R5a-SM-5LZY5 57.8
GTEX-13X6J-0011-R5b-SM-5PNWT 55.6
GTEX-13G51-0011-R5a-SM-5L3EB 55.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 55.1
GTEX-11OF3-0011-R5a-SM-57WB4 54.6
GTEX-P44H-0011-R5A-SM-2XCEX 54.3
GTEX-QVJO-0011-R5A-SM-2S1QM 54.1
GTEX-N7MS-0011-R5a-SM-2HMK8 53.4
GTEX-T5JC-0011-R5A-SM-32PLK 53.3
GTEX-13NYB-0011-R5a-SM-5MR45 52.7
GTEX-12WSC-0011-R5b-SM-5CVNS 52.2
GTEX-ZUA1-0011-R5b-SM-51MTG 51.9
GTEX-1313W-0011-R5b-SM-5L3EP 51.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 51.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 50.8
GTEX-131YS-0011-R5b-SM-5K7YB 50.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50.0
GTEX-13VXU-0011-R5a-SM-5O9D7 49.9
GTEX-11H98-0011-R5b-SM-57WCF 49.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 49.1
GTEX-14ABY-0011-R5b-SM-5SI7B 48.9
GTEX-OHPN-0011-R5A-SM-2I5FF 48.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 48.2
GTEX-13FXS-0011-R5b-SM-5LZYE 48.2
GTEX-WZTO-0011-R5B-SM-3NMC5 48.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 47.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 47.7
GTEX-WL46-0011-R5A-SM-3LK6V 47.4
GTEX-RU72-0011-R5A-SM-2TF6U 46.9
GTEX-13SLX-0011-R5a-SM-5O9BV 46.3
GTEX-13X6K-0011-R5b-SM-5PNUE 46.2
GTEX-13FLW-0011-R5a-SM-5LZX6 45.9
GTEX-14BIM-0011-R5b-SM-5S2RM 45.6
GTEX-RVPU-0011-R5A-SM-2XCAD 45.2
GTEX-Z93S-0011-R5b-SM-4RGNI 45.1
GTEX-TSE9-0011-R5A-SM-3DB7J 44.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 44.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 44.6
GTEX-T2IS-0011-R5A-SM-32QP4 44.6
GTEX-13OW6-0011-R5a-SM-5O9BK 44.4
GTEX-R55E-0011-R5A-SM-2TC5N 44.4
GTEX-11GSP-0011-R5a-SM-57WBE 43.9
GTEX-13OW7-0011-R5b-SM-5O9DM 43.6
GTEX-RVPV-0011-R5A-SM-2TF69 43.2
GTEX-13S7M-0011-R5b-SM-5P9HS 42.8
GTEX-WVLH-0011-R5A-SM-3MJFW 42.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 42.3
GTEX-13O3O-0011-R5b-SM-5KM44 41.9
GTEX-13NYS-0011-R5a-SM-5MR4D 41.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 41.6
GTEX-N7MT-0011-R5a-SM-2I3G6 41.6
GTEX-12WSD-0011-R5b-SM-5CVNG 41.1
GTEX-13OVH-0011-R5b-SM-5KM4L 41.1
GTEX-13X6I-0011-R5a-SM-5PNWW 39.9
GTEX-12ZZX-0011-R5a-SM-5HL89 39.4
GTEX-NL4W-0011-R5a-SM-2I3GD 39.4
GTEX-11WQC-0011-R5a-SM-5BC74 39.2
GTEX-145LS-0011-R5a-SM-5SI65 39.2
GTEX-WWYW-0011-R5A-SM-3NB3E 39.1
GTEX-132Q8-0011-R5a-SM-5IJDM 38.9
GTEX-12WSA-0011-R5b-SM-5GU5I 38.8
GTEX-XOTO-0011-R5A-SM-4B657 38.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 38.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 38.5
GTEX-UTHO-0011-R5A-SM-3GIJD 37.7
GTEX-13CZV-0011-R5a-SM-5K7XA 37.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 37.4
GTEX-13FLV-0011-R5a-SM-5LZWT 37.0
GTEX-13OW5-0011-R5b-SM-5L3FR 36.9
GTEX-NL3H-0011-R5a-SM-2I3GB 36.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 36.8
GTEX-144GO-0011-R5a-SM-5PNUR 36.4
GTEX-YJ89-0011-R5a-SM-4V6GM 35.4
GTEX-X4XX-0011-R5A-SM-46MWN 34.5
GTEX-12WSF-0011-R5a-SM-5HL8K 34.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 33.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 33.6
GTEX-139T8-0011-R5b-SM-5J1MO 33.5
GTEX-YFC4-0011-R5a-SM-4RGLR 33.4
GTEX-ZE7O-0011-R5a-SM-57WBO 33.3
GTEX-PVOW-0011-R5A-SM-32PL7 33.1
GTEX-13CIG-0011-R5b-SM-5L3F2 32.6
GTEX-XMD1-0011-R5A-SM-4AT47 32.6
GTEX-ZXG5-0011-R5b-SM-57WBN 31.7
GTEX-12WSB-0011-R5b-SM-5GU67 31.1
GTEX-13JVG-0011-R5a-SM-5MR4O 30.6
GTEX-X261-0011-R5A-SM-3NMB4 29.7
GTEX-QMR6-0011-R5A-SM-32PKT 29.0
GTEX-ZV68-0011-R5a-SM-4YCDW 28.0
GTEX-OXRN-0011-R5A-SM-2I5EF 27.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 27.3
GTEX-13112-0011-R5b-SM-5DUV8 26.9
GTEX-12WSH-0011-R5b-SM-5P9F3 26.2
GTEX-14BIN-0011-R5b-SM-5SI78 26.2
GTEX-NPJ7-0011-R5a-SM-33HBK 26.0
GTEX-13FHP-0011-R5b-SM-5LZY2 25.8
GTEX-144GL-0011-R5b-SM-5PNUJ 25.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 24.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 24.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 24.1
GTEX-ZVT3-0011-R5a-SM-51MSI 23.0
GTEX-139TS-0011-R5b-SM-5J2MZ 22.7
GTEX-1477Z-0011-R5b-SM-5PNUO 22.4
GTEX-11UD1-0011-R5b-SM-5P9FP 21.0
GTEX-13CF2-0011-R5a-SM-5LZWS 20.5
GTEX-145MG-0011-R5b-SM-5S2VU 19.2
GTEX-S7PM-0011-R5A-SM-3NM8G 19.0
GTEX-1445S-0011-R5a-SM-5PNUS 18.7
GTEX-13NZA-0011-R5b-SM-5KM4K 15.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

14.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 14.0
FF:10164-103B2 76 years, female 14.3
FF:10379-105H1 89 years, female 13.7

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