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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:39.2TPM
GTEx:50.4RPKM
FANTOM5:12.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA031355

 

Glandular cells

Not detected  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

39.2

overview Male, age 62
Sample 1
TPM: 35.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 40.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 44.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 49.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 34.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 53.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 37.7
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 47.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 23.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

50.4

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 50.4
Samples: 106

Max RPKM: 80.1
Min RPKM: 29
Std RPKM: 11.1
Median RPKM: 49.5
GTEX-ZY6K-1526-SM-5GZXE 80.1
GTEX-ZUA1-2826-SM-59HLE 78.9
GTEX-V1D1-1926-SM-4JBGX 73.4
GTEX-Y9LG-1826-SM-4VBQC 72.3
GTEX-132NY-2826-SM-5P9G2 70.7
GTEX-XQ3S-2526-SM-4BOOG 69.5
GTEX-11ZUS-2126-SM-5N9E6 67.8
GTEX-S33H-1826-SM-4AD65 67.6
GTEX-ZZ64-0926-SM-5E44L 67.2
GTEX-SNMC-0926-SM-4DM5U 66.6
GTEX-XOTO-2826-SM-4B65I 66.2
GTEX-WOFM-0326-SM-4OOSL 65.9
GTEX-YB5E-1826-SM-5IFI4 65.6
GTEX-WZTO-0926-SM-4PQZ3 65.2
GTEX-145LT-0626-SM-5O99E 64.2
GTEX-145LV-1226-SM-5S2QH 64.2
GTEX-13FXS-2826-SM-5LZYC 62.2
GTEX-X5EB-1826-SM-4E3K8 61.8
GTEX-WFG8-1826-SM-4LVM4 61.5
GTEX-14BMV-2326-SM-5RQJ4 61.1
GTEX-QEG4-2226-SM-4R1JM 60.6
GTEX-RWSA-2026-SM-47JX8 60.4
GTEX-13NYS-1026-SM-5KLZT 60.0
GTEX-OIZH-2026-SM-3NB1M 59.5
GTEX-139T6-1526-SM-5P9G6 59.1
GTEX-11TUW-2126-SM-5GU7B 58.6
GTEX-11DYG-2526-SM-5N9BB 58.5
GTEX-111FC-2026-SM-5GZYO 58.3
GTEX-Q2AI-1126-SM-48U19 58.0
GTEX-XMK1-1026-SM-4B65H 57.4
GTEX-SJXC-2026-SM-4DM6N 57.3
GTEX-111CU-1526-SM-5N9FS 56.5
GTEX-12C56-1326-SM-5FQSV 55.9
GTEX-NFK9-2226-SM-3MJGP 55.3
GTEX-NPJ8-2426-SM-3MJHL 53.5
GTEX-U4B1-1426-SM-4DXTX 53.4
GTEX-11OF3-1726-SM-5GU5Q 52.9
GTEX-S95S-1026-SM-4B64M 52.8
GTEX-U3ZM-0926-SM-4DXSW 52.8
GTEX-YF7O-1926-SM-4W1YQ 52.8
GTEX-131XF-1926-SM-5DUW4 52.6
GTEX-11NSD-0826-SM-5986S 52.4
GTEX-QV31-1026-SM-4R1K3 52.0
GTEX-PLZ6-1126-SM-3P5ZR 51.8
GTEX-T8EM-1826-SM-4DM7F 51.4
GTEX-146FQ-1726-SM-5QGPX 50.6
GTEX-ZDYS-1226-SM-5IJF3 50.6
GTEX-WK11-2626-SM-4OOSK 50.5
GTEX-14E6E-1126-SM-5S2R4 50.2
GTEX-XAJ8-0626-SM-47JY4 50.0
GTEX-UTHO-2726-SM-4JBH9 49.8
GTEX-13FTW-1226-SM-5LZZ1 49.7
GTEX-S4Q7-1026-SM-4AD75 49.5
GTEX-ZTX8-1026-SM-5EGHD 49.5
GTEX-11TT1-2026-SM-5EQM8 48.4
GTEX-13OW8-0426-SM-5J2NR 47.9
GTEX-Y8E4-2126-SM-5RQHO 47.9
GTEX-ZLFU-1726-SM-4WWBU 47.9
GTEX-13111-1326-SM-5GCNO 47.5
GTEX-OOBJ-2026-SM-3NB1R 47.4
GTEX-U412-2026-SM-4DXSI 47.0
GTEX-111YS-1726-SM-5GIED 46.1
GTEX-RM2N-1126-SM-48FCY 45.8
GTEX-V955-1826-SM-4JBIL 45.6
GTEX-14ABY-0726-SM-5Q5DF 45.2
GTEX-117YX-1526-SM-5H12T 45.1
GTEX-13O61-1726-SM-5KM46 45.1
GTEX-1399R-0526-SM-5IJEF 44.8
GTEX-XGQ4-1826-SM-4AT6F 44.5
GTEX-SNOS-1026-SM-4DM4Y 44.3
GTEX-117YW-1426-SM-5EGGO 44.2
GTEX-13N2G-1826-SM-5KM1I 43.8
GTEX-132QS-1126-SM-5P9GC 43.7
GTEX-QV44-1526-SM-4R1KI 43.4
GTEX-OOBK-2025-SM-3LK5S 43.2
GTEX-11P82-1126-SM-5BC5K 43.1
GTEX-13G51-2326-SM-5LZXV 43.1
GTEX-XPVG-2026-SM-4B65E 43.1
GTEX-WFG7-1826-SM-3GIL1 42.6
GTEX-YJ8A-1126-SM-5IFJU 42.6
GTEX-WH7G-1726-SM-4LVKY 42.3
GTEX-11P7K-0626-SM-5985Z 42.2
GTEX-QMRM-1426-SM-4R1K8 42.1
GTEX-1399T-1226-SM-5P9J5 41.9
GTEX-ZT9W-1626-SM-4YCDQ 41.9
GTEX-WFON-1626-SM-4LVMV 41.6
GTEX-12ZZZ-2026-SM-5LZWJ 41.3
GTEX-144GM-0826-SM-5O98R 41.1
GTEX-13O21-1126-SM-5N9EV 40.8
GTEX-13RTJ-2126-SM-5S2PZ 40.5
GTEX-U8XE-2526-SM-4E3IT 40.0
GTEX-QLQ7-1326-SM-4R1JY 39.9
GTEX-ZTTD-2726-SM-57WFA 39.0
GTEX-11EQ9-1726-SM-5HL6U 38.6
GTEX-11O72-2726-SM-5HL6K 38.3
GTEX-ZPU1-2026-SM-57WFI 38.1
GTEX-ZVP2-0826-SM-59HJ6 37.2
GTEX-12696-2226-SM-5EQ65 36.3
GTEX-148VJ-1826-SM-5Q5DV 35.1
GTEX-13FHO-2826-SM-5K7ZA 32.3
GTEX-REY6-2126-SM-48FD9 32.3
GTEX-VJYA-1226-SM-3GIJ6 31.1
GTEX-12BJ1-1226-SM-5LUAE 30.7
GTEX-11WQK-2726-SM-5EQMU 29.8
GTEX-14C5O-2826-SM-5RQI6 29.2
GTEX-S3XE-1326-SM-4AD4H 29.0
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

12.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 12.4
FF:10022-101D4 73,79,93 years, male 12.4

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