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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:22.8TPM
GTEx:8.4RPKM
FANTOM5:72.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody CAB018777

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:Medium
 
 

Antibody staining

Antibody CAB018777

  

Adipocytes

 High  

Fibroblasts

 Medium  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

22.8
N/A Female, age 80
Sample 1
TPM: 23.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 33.4
N/A Female, age 57
Sample 3
TPM: 23.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 13.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 20.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

8.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 7.4
Samples: 350

Max RPKM: 42.4
Min RPKM: 1.8
Std RPKM: 4.1
Median RPKM: 6.5
GTEX-RTLS-0226-SM-2TF5E 42.4
GTEX-ZF28-0226-SM-5S2OE 28.1
GTEX-145MO-0426-SM-5QGP6 26.6
GTEX-SNMC-1326-SM-2XCFK 22.4
GTEX-11WQC-2426-SM-5EQKQ 20.9
GTEX-11P7K-2026-SM-5GU74 20.2
GTEX-13X6K-0226-SM-5QGPB 18.2
GTEX-XPVG-2726-SM-4B66W 17.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 10.0
Samples: 227

Max RPKM: 31.2
Min RPKM: 2.6
Std RPKM: 4.8
Median RPKM: 8.5
GTEX-13JUV-0626-SM-5J1MQ 31.2
GTEX-13N11-1826-SM-5IJDS 25.0
GTEX-13X6K-0726-SM-5LU2Z 25.0
GTEX-WXYG-0926-SM-3NB2O 23.2
GTEX-13OW8-0326-SM-5L3FB 22.4
GTEX-11P7K-0826-SM-5BC5F 22.3
GTEX-12BJ1-0826-SM-5EQ5P 22.3
GTEX-13W46-1226-SM-5SIAS 21.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

72.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 72.5
FF:10010-101C1 65,65,76 years, mixed 72.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.