Tissue expression of FAAP100 - Summary - The Human Protein Atlas

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FAAP100

TISSUE

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CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	FAAP100
Gene description	Fanconi anemia core complex associated protein 100
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

General cytoplasmic expression.

DATA RELIABILITY
Data reliability description	Pending external verification. Subcellular localization is contradicted by limited literature.
Reliability score	Uncertain based on 2 antibodies. HPA023954 , HPA026532
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	FAAP100 (HGNC Symbol)
Synonyms	C17orf70, FLJ22175
Description	Fanconi anemia core complex associated protein 100 (HGNC Symbol)
Entrez gene summary	FAAP100 is a component of the Fanconi anemia (FA; MIM 277650) core complex and is required for core complex stability and FANCD2 (see MIM 227646) monoubiquitination (Ling et al., 2007 [PubMed 17396147]).[supplied by OMIM, Mar 2008]
Chromosome	17
Cytoband	q25.3
Chromosome location (bp)	81539885 - 81553961
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000185504 (version 83.38)
Entrez gene	80233
UniProt	Q0VG06 (UniProt - Evidence at protein level)
neXtProt	NX_Q0VG06
Antibodypedia	FAAP100 antibodies

PROTEIN BROWSER

FAAP100-001	FAAP100-004	FAAP100-006	FAAP100-007	FAAP100-008

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAAP100-001 ENSP00000333283 ENST00000327787	Q0VG06 [Direct mapping] Fanconi anemia core complex-associated protein 100 Show all	MEMSAT3 predicted membrane proteins SCAMPI predicted membrane proteins Phobius predicted secreted proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003677 [DNA binding] GO:0005515 [protein binding] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0006281 [DNA repair] GO:0036297 [interstrand cross-link repair] GO:0043240 [Fanconi anaemia nuclear complex] GO:0045111 [intermediate filament cytoskeleton] Show all	881 aa 93.4 kDa	No	0
FAAP100-004 ENSP00000399674 ENST00000425898	E7EVV8 [Direct mapping] Fanconi anemia-associated protein of 100 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0006281 [DNA repair] GO:0043240 [Fanconi anaemia nuclear complex] GO:0045111 [intermediate filament cytoskeleton] Show all	530 aa 56.6 kDa	No	0
FAAP100-006 ENSP00000443415 ENST00000536161	F5H5G6 [Direct mapping] Fanconi anemia-associated protein of 100 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		172 aa 18 kDa	No	0
FAAP100-007 ENSP00000444241 ENST00000544302	F5GZS4 [Direct mapping] Fanconi anemia-associated protein of 100 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		249 aa 25.8 kDa	No	0
FAAP100-008 ENSP00000438149 ENST00000541246	F5H095 [Direct mapping] Fanconi anemia-associated protein of 100 kDa Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		301 aa 31.1 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.