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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:515.3TPM
GTEx:199.5RPKM
FANTOM5:1195.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA018884

 

Antibody CAB012463

 

Glandular cells

High   High  
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

515.3

overview Male, age 65
Sample 1
TPM: 529.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 303.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 568.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 660.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

199.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 199.5
Samples: 88

Max RPKM: 439.9
Min RPKM: 74.4
Std RPKM: 75.3
Median RPKM: 194.5
GTEX-ZYFG-2026-SM-5E43Y 439.9
GTEX-XGQ4-1326-SM-4GIDU 406.7
GTEX-13FTW-2026-SM-5IJE2 370.4
GTEX-WFG8-1626-SM-4LVMB 335.9
GTEX-133LE-1426-SM-5IFH1 326.9
GTEX-ZLV1-1126-SM-4WWBW 317.3
GTEX-ZVT2-2126-SM-5NQ93 314.9
GTEX-13D11-0726-SM-5LZZB 310.5
GTEX-ZXES-1526-SM-5NQ95 305.5
GTEX-13RTK-0826-SM-5Q5C6 300.2
GTEX-VJYA-0926-SM-4KL1N 299.6
GTEX-YB5E-1526-SM-5IFIE 290.7
GTEX-ZA64-1226-SM-5HL7B 288.6
GTEX-14DAR-1426-SM-5RQIR 277.4
GTEX-1122O-1326-SM-5H11F 276.2
GTEX-ZVZP-1826-SM-5GZXB 266.7
GTEX-Y5LM-1626-SM-4VDTB 266.3
GTEX-145LT-1026-SM-5LU9O 261.5
GTEX-ZTPG-2626-SM-57WFX 260.5
GTEX-13CF3-1226-SM-5LZXN 245.4
GTEX-ZYWO-1526-SM-5SIAL 239.2
GTEX-ZPIC-2326-SM-57WDW 237.5
GTEX-ZVP2-1726-SM-5GU5P 236.8
GTEX-11EQ9-1326-SM-5985X 236.8
GTEX-ZZ64-0526-SM-5GZXM 235.4
GTEX-14E6E-1626-SM-5RQI7 233.6
GTEX-ZTX8-0526-SM-59HLD 231.9
GTEX-139YR-2226-SM-5IFFW 231.7
GTEX-131XF-1326-SM-5GCMQ 229.1
GTEX-13113-1226-SM-5EGHT 225.8
GTEX-XBED-1426-SM-4AT4G 223.3
GTEX-XAJ8-0526-SM-47JYK 217.4
GTEX-ZPCL-1726-SM-57WEO 216.5
GTEX-XUZC-1426-SM-4BRV3 215.2
GTEX-XXEK-1026-SM-4BRUW 214.7
GTEX-11DXX-1626-SM-5H11H 213.9
GTEX-11P82-0826-SM-5P9GU 209.6
GTEX-111YS-1426-SM-5GID8 203.1
GTEX-139T6-1026-SM-5IJGC 199.4
GTEX-YEC4-1726-SM-4W21E 199.0
GTEX-Y9LG-1626-SM-5IFHM 197.5
GTEX-ZTSS-0926-SM-59865 197.3
GTEX-131XG-1726-SM-5LZUR 195.6
GTEX-WFJO-0926-SM-4LVM2 194.9
GTEX-13PL7-2626-SM-5IFH4 194.0
GTEX-YF7O-1826-SM-5IFIU 193.3
GTEX-11I78-1126-SM-5A5K5 189.1
GTEX-11NSD-1726-SM-5N9C3 189.0
GTEX-11P7K-1626-SM-5GU63 187.5
GTEX-ZP4G-1626-SM-57WGD 180.5
GTEX-WQUQ-2426-SM-4MVNW 178.0
GTEX-X5EB-1626-SM-4E3IV 177.5
GTEX-ZEX8-1826-SM-57WBH 176.8
GTEX-1399R-2026-SM-5K7WN 176.2
GTEX-Z9EW-0926-SM-5CVMM 171.1
GTEX-13FH7-1226-SM-5IJFK 169.0
GTEX-1399S-2026-SM-5KM4B 166.1
GTEX-13O61-1326-SM-5KM31 164.1
GTEX-WRHK-1026-SM-4MVOD 155.4
GTEX-ZLFU-1526-SM-4WWBT 152.8
GTEX-11DXZ-1326-SM-5H11X 150.2
GTEX-WFG7-1726-SM-4LVME 149.1
GTEX-WH7G-1626-SM-4LVMY 147.2
GTEX-ZQG8-2526-SM-57WEQ 144.6
GTEX-UPK5-2026-SM-4JBIM 144.5
GTEX-11XUK-1426-SM-5EQMG 143.3
GTEX-12BJ1-1926-SM-5HL9Z 142.3
GTEX-111CU-1326-SM-5NQ8L 137.5
GTEX-X15G-1426-SM-4PQZK 137.0
GTEX-1399U-2126-SM-5IFEZ 132.4
GTEX-XMK1-1826-SM-4B66F 122.9
GTEX-13111-1426-SM-5DUW3 122.3
GTEX-Y3IK-1726-SM-4YCCR 121.3
GTEX-1192X-2526-SM-59868 119.6
GTEX-145ME-0926-SM-5O9AR 118.4
GTEX-11VI4-1626-SM-5EQKO 116.0
GTEX-Y114-1426-SM-4TT6W 115.5
GTEX-13O21-1026-SM-5IJDU 115.3
GTEX-VUSG-1726-SM-4KKZL 111.9
GTEX-13QBU-1926-SM-5IJEW 111.3
GTEX-117YX-0326-SM-5GICL 108.7
GTEX-148VJ-2226-SM-5NQ9M 104.6
GTEX-12WSK-1526-SM-5CVNO 93.6
GTEX-ZF2S-1726-SM-57WFT 90.9
GTEX-WEY5-1526-SM-4LMJF 89.8
GTEX-13OVI-1926-SM-5IJCG 89.4
GTEX-ZC5H-2326-SM-4WAYT 87.0
GTEX-ZQUD-0926-SM-57WE3 74.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1195.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1195.0
FF:10024-101D6 15,40,85 years, mixed 1195.0

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