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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.9TPM
GTEx:7.7RPKM
FANTOM5:36.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA055380

  

Antibody CAB045980

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA055380

  

Antibody CAB045980

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

20.9
N/A Female, age 80
Sample 1
TPM: 28.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 22.0
N/A Female, age 57
Sample 3
TPM: 19.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 9.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 25.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

7.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 8.1
Samples: 350

Max RPKM: 44.7
Min RPKM: 0.7
Std RPKM: 6.6
Median RPKM: 5.9
GTEX-12WSB-0226-SM-5GCOR 44.7
GTEX-13FTY-0626-SM-5L3F8 41.7
GTEX-113IC-0226-SM-5HL5C 38.1
GTEX-ZE9C-2826-SM-5S2MO 37.6
GTEX-146FQ-0226-SM-5NQAL 36.1
GTEX-11ZVC-2626-SM-5FQTA 31.7
GTEX-11WQC-2426-SM-5EQKQ 29.4
GTEX-11ZU8-2426-SM-5EQMV 28.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 7.1
Samples: 227

Max RPKM: 50.9
Min RPKM: 0.5
Std RPKM: 6.8
Median RPKM: 4.7
GTEX-13OW6-2426-SM-5K7WO 50.9
GTEX-ZE9C-1326-SM-5S2OW 39.1
GTEX-12WSI-1526-SM-5GCNM 27.9
GTEX-XOT4-0826-SM-4B66Y 27.6
GTEX-11NV4-1426-SM-5BC4W 24.8
GTEX-113JC-0726-SM-5GZZR 24.2
GTEX-11NUK-2026-SM-5PNVZ 23.3
GTEX-1399T-1326-SM-5PNVH 22.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

36.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 36.7
FF:10010-101C1 65,65,76 years, mixed 36.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.