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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:56.0TPM
GTEx:16.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA055380

 

Antibody CAB045980

 

Endothelial cells

Not detected   High  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

56.0

N/A Male, age 5
Sample 1
TPM: 60.2
overview Female, age 40
Sample 2
TPM: 51.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 56.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 14.5
Samples: 114

Max RPKM: 286.9
Min RPKM: 5.2
Std RPKM: 25.8
Median RPKM: 11.9
GTEX-144FL-3026-SM-5O99C 286.9
GTEX-QDT8-2926-SM-32PKC 27.6
GTEX-111FC-3126-SM-5GZZ2 21.4
GTEX-PVOW-2526-SM-2XCF7 19.8
GTEX-UTHO-3026-SM-3GAFB 19.3
GTEX-X4XX-3026-SM-3NMB2 19.1
GTEX-QVJO-1426-SM-2S1QY 17.8
GTEX-11DXY-3226-SM-5GIDE 17.4
GTEX-13OW6-3026-SM-5J2MI 16.8
GTEX-13NYB-3026-SM-5IJD7 16.6
GTEX-QMR6-1426-SM-32PLA 16.5
GTEX-12ZZZ-3026-SM-5BC67 16.3
GTEX-13NYC-2826-SM-5K7WR 15.8
GTEX-XLM4-3026-SM-4AT6L 15.8
GTEX-TSE9-3026-SM-3DB76 15.7
GTEX-X585-3026-SM-46MWF 15.7
GTEX-14ASI-3026-SM-5S2PN 15.6
GTEX-ZAK1-3026-SM-5S2MJ 15.4
GTEX-T6MN-2626-SM-32PMQ 15.2
GTEX-WL46-2926-SM-3LK82 15.2
GTEX-WVLH-3026-SM-3MJG9 15.2
GTEX-11NUK-2926-SM-5A5MD 15.1
GTEX-Y8DK-0826-SM-4TT3T 15.0
GTEX-131YS-3126-SM-5KLYT 14.9
GTEX-ZVT3-3026-SM-5E43N 14.6
GTEX-145LS-3126-SM-5Q5BY 14.5
GTEX-11PRG-2926-SM-5987A 14.4
GTEX-13SLX-3126-SM-5S2Q5 14.3
GTEX-14BMV-3026-SM-5S2PQ 14.3
GTEX-WZTO-2926-SM-3NM9I 14.2
GTEX-132Q8-3026-SM-5PNVG 14.1
GTEX-145MH-3026-SM-5Q5DZ 13.9
GTEX-RNOR-2326-SM-2TF4I 13.9
GTEX-145MG-3026-SM-5RQJA 13.8
GTEX-WWYW-3126-SM-3NB39 13.8
GTEX-12ZZX-2926-SM-5GCOQ 13.7
GTEX-NPJ8-1526-SM-2D7VU 13.7
GTEX-144GL-3026-SM-5Q5CW 13.4
GTEX-1192X-3126-SM-5N9BY 13.0
GTEX-13FHP-3026-SM-5IJBS 13.0
GTEX-1313W-3126-SM-5LZUI 12.9
GTEX-QVUS-2826-SM-3GADB 12.9
GTEX-ZUA1-3026-SM-59HJC 12.9
GTEX-ZZPT-3026-SM-5GZXH 12.9
GTEX-11ZUS-2926-SM-5FQSL 12.7
GTEX-12WSC-3026-SM-5GCNF 12.7
GTEX-1399T-3026-SM-5KLZC 12.6
GTEX-13FXS-3126-SM-5J2NN 12.6
GTEX-T5JC-2426-SM-3NMDB 12.6
GTEX-13QIC-2926-SM-5J2NF 12.5
GTEX-13VXU-2926-SM-5LU5C 12.2
GTEX-145MF-2726-SM-5O995 12.2
GTEX-T2IS-3026-SM-32QPM 12.2
GTEX-ZAJG-3126-SM-5HL9J 12.1
GTEX-13FHO-3026-SM-5J1O9 12.0
GTEX-13FLW-1426-SM-5K7YE 12.0
GTEX-11OF3-2926-SM-5HL78 11.9
GTEX-12126-1026-SM-5P9JJ 11.9
GTEX-12ZZY-3026-SM-5GCOU 11.9
GTEX-13NYS-3126-SM-5KLYV 11.8
GTEX-13OW8-2826-SM-5L3GC 11.8
GTEX-11DXW-1126-SM-5H12Q 11.7
GTEX-13OVH-3026-SM-5MR4N 11.7
GTEX-13PL6-3126-SM-5LUAR 11.7
GTEX-117XS-3026-SM-5N9CA 11.5
GTEX-11EI6-3026-SM-5GZZO 11.4
GTEX-RU72-3026-SM-5SI7Y 11.4
GTEX-Z93S-2926-SM-57WB9 11.4
GTEX-13S7M-3126-SM-5RQJQ 11.2
GTEX-14A5I-2926-SM-5Q5CQ 11.1
GTEX-12WSH-3026-SM-5CVNI 11.0
GTEX-1128S-2726-SM-5H12C 10.9
GTEX-Y111-2726-SM-4TT3N 10.9
GTEX-13O3Q-2926-SM-5KM45 10.8
GTEX-13JVG-3126-SM-5L3FH 10.7
GTEX-13O3O-3126-SM-5KM3H 10.6
GTEX-YJ89-3026-SM-5IFJI 10.6
GTEX-12ZZW-2926-SM-5LZUP 10.5
GTEX-13OW7-3026-SM-5L3GY 10.4
GTEX-R55F-1326-SM-5S2V4 10.4
GTEX-11GSO-2926-SM-5HL73 10.3
GTEX-12WSD-3126-SM-5HL7P 10.2
GTEX-11GSP-3226-SM-5986O 10.1
GTEX-11GS4-3126-SM-5A5LH 9.9
GTEX-11O72-2926-SM-5BC4V 9.8
GTEX-N7MT-1126-SM-5SI7V 9.8
GTEX-ZYFD-3026-SM-5E44C 9.8
GTEX-XOTO-3026-SM-4B65M 9.7
GTEX-NPJ7-2726-SM-2I3FT 9.6
GTEX-WHSE-3026-SM-3P5ZH 9.6
GTEX-OXRN-2426-SM-2I5EQ 9.5
GTEX-YFC4-3126-SM-5PNV6 9.5
GTEX-13X6J-3026-SM-5Q5CU 9.2
GTEX-11ONC-2926-SM-5P9JM 9.1
GTEX-PWO3-0926-SM-2I5EY 8.7
GTEX-13IVO-2926-SM-5L3CZ 8.5
GTEX-11NV4-2126-SM-5N9DS 8.3
GTEX-1117F-3226-SM-5N9CT 8.2
GTEX-12WSA-2926-SM-5EQ4D 8.2
GTEX-131XW-3126-SM-5LZUC 8.2
GTEX-139T8-1026-SM-5J2MC 8.2
GTEX-13G51-3026-SM-5IJB8 8.1
GTEX-13X6K-2926-SM-5Q5D5 7.8
GTEX-11WQK-3026-SM-5EQL6 7.5
GTEX-Q2AG-2926-SM-2HMJ3 7.5
GTEX-11EMC-3226-SM-5EGKW 7.3
GTEX-ZE7O-3126-SM-5HL5X 7.3
GTEX-11TTK-2926-SM-5PNYP 7.0
GTEX-11OC5-0726-SM-5P9JK 6.9
GTEX-147GR-3026-SM-5S2ML 6.6
GTEX-13PVQ-3026-SM-5SI93 6.1
GTEX-13OVJ-2826-SM-5L3GW 5.6
GTEX-1445S-3026-SM-5O9BR 5.5
GTEX-13JUV-2926-SM-5LZX7 5.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 19.3
Samples: 108

Max RPKM: 475.9
Min RPKM: 5.6
Std RPKM: 44.4
Median RPKM: 15.2
GTEX-X4EP-0011-R10B-SM-4QASJ 475.9
GTEX-QDT8-0011-R10A-SM-32PKG 37.8
GTEX-11ZUS-0011-R10b-SM-5BC79 34.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 30.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 26.3
GTEX-X4XX-0011-R10B-SM-46MWO 26.3
GTEX-X585-0011-R10A-SM-46MUY 24.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 21.4
GTEX-NL3H-0011-R10A-SM-2I3E9 20.8
GTEX-P44H-0011-R10A-SM-2XCEK 20.4
GTEX-145MG-0011-R10a-SM-5PNWG 20.3
GTEX-WWYW-0011-R10A-SM-3NB35 20.3
GTEX-12WSD-0011-R10b-SM-5GU79 20.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 20.0
GTEX-QMR6-0011-R10A-SM-32PKO 19.9
GTEX-T6MN-0011-R10A-SM-32QP7 19.9
GTEX-13S7M-0011-R10b-SM-5PNZB 19.4
GTEX-13QIC-0011-R10a-SM-5O9C7 19.2
GTEX-WL46-0011-R10A-SM-3MJFQ 19.0
GTEX-13NYB-0011-R10a-SM-5KM43 18.9
GTEX-13X6I-0011-R10a-SM-5PNWI 18.9
GTEX-WVLH-0011-R10A-SM-3MJFM 18.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 18.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 18.3
GTEX-QVUS-0011-R10A-SM-3GIK3 18.3
GTEX-XLM4-0011-R10A-SM-4AT5P 18.3
GTEX-13OW6-0011-R10a-SM-5L3HE 18.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 17.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 17.8
GTEX-145MH-0011-R10b-SM-5PNUK 17.7
GTEX-13SLX-0011-R10a-SM-5P9HV 17.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 17.6
GTEX-12WSC-0011-R10a-SM-5GU57 17.4
GTEX-13N2G-0011-R10a-SM-5MR34 17.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 17.1
GTEX-1313W-0011-R10b-SM-5DUXA 17.0
GTEX-13NYS-0011-R10a-SM-5MR4S 16.6
GTEX-131YS-0011-R10b-SM-5EQ5N 16.5
GTEX-14BIN-0011-R10a-SM-5S2UA 16.4
GTEX-S7SE-0011-R10A-SM-2XCDF 16.4
GTEX-145LS-0011-R10a-SM-5PNUQ 16.1
GTEX-ZF28-0011-R10a-SM-4WWEH 16.1
GTEX-N7MT-0011-R10A-SM-2I3E1 15.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 15.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 15.7
GTEX-12WSH-0011-R10a-SM-5LZUS 15.6
GTEX-13O3O-0011-R10a-SM-5LUA9 15.6
GTEX-13O3Q-0011-R10b-SM-5KM39 15.6
GTEX-13SLW-0011-R10a-SM-5S2UI 15.6
GTEX-YJ89-0011-R10a-SM-4SOK9 15.6
GTEX-12WSM-0011-R10a-SM-5DUWV 15.5
GTEX-147GR-0011-R10b-SM-5S2UM 15.5
GTEX-13FXS-0011-R10a-SM-5J2MA 15.4
GTEX-YFC4-0011-R10a-SM-4SOK5 15.2
GTEX-13CZV-0011-R10b-SM-5LZYD 15.1
GTEX-Z93S-0011-R10a-SM-4RGNM 15.1
GTEX-131XH-0011-R10a-SM-5EGLJ 14.9
GTEX-13JUV-0011-R10b-SM-5LZXR 14.9
GTEX-T5JC-0011-R10A-SM-32PM2 14.9
GTEX-WZTO-0011-R10B-SM-4E3KB 14.9
GTEX-13X6K-0011-R10a-SM-5P9JR 14.5
GTEX-12WSF-0011-R10a-SM-5LZVH 14.2
GTEX-13OW7-0011-R10a-SM-5L3H3 14.1
GTEX-13FLW-0011-R10b-SM-5LZZF 14.0
GTEX-ZUA1-0011-R10a-SM-51MT6 14.0
GTEX-13X6J-0011-R10b-SM-5PNWA 13.7
GTEX-ZVT3-0011-R10b-SM-57WB6 13.7
GTEX-13OVL-0011-R10a-SM-5L3GS 13.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 13.2
GTEX-14BIL-0011-R10a-SM-5SI75 13.1
GTEX-12WSE-0011-R10b-SM-5P9JV 12.7
GTEX-145LU-0011-R10a-SM-5PNWJ 12.6
GTEX-RVPU-0011-R10A-SM-2XCAH 12.5
GTEX-11H98-0011-R10b-SM-5NQ98 12.4
GTEX-13N1W-0011-R10b-SM-5MR4H 12.4
GTEX-139TS-0011-R10a-SM-5K7TU 12.2
GTEX-12126-0011-R10b-SM-5BC6T 12.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 12.1
GTEX-N7MS-0011-R10A-SM-2HMJK 12.0
GTEX-TSE9-0011-R10A-SM-3DB7O 12.0
GTEX-13FHO-0011-R10b-SM-5J2MM 11.8
GTEX-OXRN-0011-R10A-SM-2I5GC 11.8
GTEX-12WSA-0011-R10b-SM-5P9ET 11.7
GTEX-11WQC-0011-R10a-SM-57WCT 11.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 11.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 11.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 10.6
GTEX-XMD1-0011-R10A-SM-4AT4A 10.6
GTEX-13G51-0011-R10b-SM-5LZYF 9.6
GTEX-13OW8-0011-R10a-SM-5L3H6 9.5
GTEX-147F4-0011-R10b-SM-5S2WC 9.5
GTEX-NL4W-0011-R10A-SM-2I3DY 9.3
GTEX-13NZA-0011-R10b-SM-5KM54 8.3
GTEX-1445S-0011-R10a-SM-5PNWB 8.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 8.2
GTEX-ZXG5-0011-R10a-SM-57WDD 8.1
GTEX-11WQK-0011-R10a-SM-5BC6R 7.8
GTEX-13JVG-0011-R10b-SM-5KM2P 7.3
GTEX-1477Z-0011-R10b-SM-5S2RF 7.3
GTEX-OXRO-0011-R10A-SM-2I5EH 7.2
GTEX-X261-0011-R10B-SM-4E3JT 7.2
GTEX-14753-0011-R10b-SM-5S2WE 6.0
GTEX-131XW-0011-R10a-SM-5DUVA 5.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 5.8
GTEX-13IVO-0011-R10a-SM-5LZY3 5.7
GTEX-13QJC-0011-R10a-SM-5SI63 5.7
GTEX-ZV68-0011-R10a-SM-51MT7 5.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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