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C16orf54

CANCER ATLAS

Gene description

 Chromosome 16 open reading frame 54

Protein class

 Predicted membrane proteins

Protein evidence

 Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY
HPA060546

GENE INFORMATION

Gene name

 C16orf54 (HGNC Symbol)

Synonyms

 FLJ35681

Description

 Chromosome 16 open reading frame 54 (HGNC Symbol)

Entrez gene summary

Chromosome

 16

Cytoband

 p11.2

Chromosome location (bp)

 29742463 - 29746006

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000185905 (version 83.38)

Entrez gene

 283897

UniProt

 Q6UWD8 (UniProt - Evidence at protein level)

neXtProt

 NX_Q6UWD8

Antibodypedia

 C16orf54 antibodies

PROTEIN BROWSER
C16orf54-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
C16orf54-001
ENSP00000327506
ENST00000329410
Q6UWD8 [Direct mapping]
Transmembrane protein C16orf54
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Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0016021 [integral component of membrane]
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 224 aa
24.4 kDa 		No 1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.