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AIDA

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:78.7TPM
GTEx:11.6RPKM
FANTOM5:38.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA027935

  

Adipocytes

 Low  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA027935

  

Adipocytes

 Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

78.7
N/A Female, age 80
Sample 1
TPM: 82.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 84.6
N/A Female, age 57
Sample 3
TPM: 78.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 77.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 70.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.6
Samples: 350

Max RPKM: 27.9
Min RPKM: 6.9
Std RPKM: 2.8
Median RPKM: 11.1
GTEX-POYW-0726-SM-2XCEO 27.9
GTEX-SNMC-1326-SM-2XCFK 25.4
GTEX-O5YT-0226-SM-32PK5 21.8
GTEX-TSE9-0226-SM-3DB84 21.8
GTEX-T6MO-1726-SM-33HB8 20.2
GTEX-T8EM-1126-SM-3DB7D 19.6
GTEX-ZVE2-0326-SM-57WFC 19.6
GTEX-WEY5-1926-SM-3GIL8 19.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.6
Samples: 227

Max RPKM: 23.6
Min RPKM: 4.4
Std RPKM: 3.4
Median RPKM: 11.3
GTEX-13PDP-1226-SM-5K7TW 23.6
GTEX-VUSG-1426-SM-3GIJN 21.3
GTEX-13NYS-0726-SM-5J1OR 20.5
GTEX-11NV4-1426-SM-5BC4W 19.4
GTEX-11PRG-1526-SM-5HL6Z 19.4
GTEX-12ZZX-1726-SM-5BC63 19.4
GTEX-WFJO-1026-SM-3GIKL 19.2
GTEX-XAJ8-0226-SM-4GIB2 19.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

38.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 38.9
FF:10010-101C1 65,65,76 years, mixed 38.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.