Expression of C9orf47 in cancer - Summary - The Human Protein Atlas

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C9orf47

TISSUE

CELL

CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

CANCER ATLAS

Gene description

Chromosome 9 open reading frame 47

Protein class

Predicted secreted proteins

Protein evidence

Evidence at transcript level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

CAB009902

GENE INFORMATION
Gene name	C9orf47 (HGNC Symbol)
Synonyms	bA791O21.3, C9orf108, FLJ37523
Description	Chromosome 9 open reading frame 47 (HGNC Symbol)
Entrez gene summary
Chromosome	9
Cytoband	q22.1
Chromosome location (bp)	88990863 - 88996140
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000186354 (version 83.38)
Entrez gene	286223
UniProt	Q6ZRZ4 (UniProt - Evidence at transcript level)
neXtProt	NX_Q6ZRZ4
Antibodypedia	C9orf47 antibodies

PROTEIN BROWSER

C9orf47-001	C9orf47-002	C9orf47-003

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
C9orf47-001 ENSP00000365011 ENST00000375851	Q6ZRZ4 [Direct mapping] Uncharacterized protein C9orf47 Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005576 [extracellular region] Show all	183 aa 20.1 kDa	Yes	0
C9orf47-002 ENSP00000365010 ENST00000375850	Q5SQD6 [Direct mapping] Uncharacterized protein C9orf47 Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		235 aa 25.7 kDa	Yes	0
C9orf47-003 ENSP00000335616 ENST00000334490	Q6ZRZ4 [Direct mapping] Uncharacterized protein C9orf47 Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005576 [extracellular region] Show all	202 aa 22.3 kDa	Yes	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.