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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:21.9RPKM
FANTOM5:75.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA003302

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

21.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 21.9
Samples: 117

Max RPKM: 37.3
Min RPKM: 9.8
Std RPKM: 4.7
Median RPKM: 21.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 37.3
GTEX-13NYS-0011-R5a-SM-5MR4D 35.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 33.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 33.0
GTEX-11H98-0011-R5b-SM-57WCF 31.3
GTEX-XMD1-0011-R5A-SM-4AT47 30.8
GTEX-WWYW-0011-R5A-SM-3NB3E 30.5
GTEX-QMR6-0011-R5A-SM-32PKT 29.9
GTEX-132Q8-0011-R5a-SM-5IJDM 29.5
GTEX-12WSB-0011-R5b-SM-5GU67 29.4
GTEX-R55E-0011-R5A-SM-2TC5N 29.1
GTEX-P44H-0011-R5A-SM-2XCEX 28.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 28.2
GTEX-QVJO-0011-R5A-SM-2S1QM 27.8
GTEX-13JVG-0011-R5a-SM-5MR4O 27.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 26.6
GTEX-UTHO-0011-R5A-SM-3GIJD 26.4
GTEX-13JUV-0011-R5a-SM-5LZY5 26.0
GTEX-13X6I-0011-R5a-SM-5PNWW 26.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 25.8
GTEX-X4XX-0011-R5A-SM-46MWN 25.6
GTEX-T2IS-0011-R5A-SM-32QP4 25.5
GTEX-T6MN-0011-R5A-SM-32QPD 25.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 25.2
GTEX-N7MT-0011-R5a-SM-2I3G6 25.2
GTEX-131YS-0011-R5b-SM-5K7YB 25.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 25.0
GTEX-NL4W-0011-R5a-SM-2I3GD 24.6
GTEX-12WSA-0011-R5b-SM-5GU5I 24.5
GTEX-PVOW-0011-R5A-SM-32PL7 24.4
GTEX-WZTO-0011-R5B-SM-3NMC5 24.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 24.2
GTEX-T5JC-0011-R5A-SM-32PLK 24.2
GTEX-WVLH-0011-R5A-SM-3MJFW 24.1
GTEX-13OW6-0011-R5a-SM-5O9BK 24.0
GTEX-X261-0011-R5A-SM-3NMB4 23.8
GTEX-RU72-0011-R5A-SM-2TF6U 23.7
GTEX-144GO-0011-R5a-SM-5PNUR 23.6
GTEX-13FLV-0011-R5a-SM-5LZWT 23.5
GTEX-11GSP-0011-R5a-SM-57WBE 23.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 23.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 23.1
GTEX-OHPN-0011-R5A-SM-2I5FF 22.8
GTEX-139TT-0011-R5b-SM-5K7W8 22.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 22.5
GTEX-1445S-0011-R5a-SM-5PNUS 22.5
GTEX-NL3H-0011-R5a-SM-2I3GB 22.5
GTEX-13CZV-0011-R5a-SM-5K7XA 22.4
GTEX-RVPV-0011-R5A-SM-2TF69 22.4
GTEX-S7SE-0011-R5A-SM-2XCDA 22.2
GTEX-13OW5-0011-R5b-SM-5L3FR 22.1
GTEX-N7MS-0011-R5a-SM-2HMK8 22.1
GTEX-NPJ7-0011-R5a-SM-33HBK 22.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 21.9
GTEX-13G51-0011-R5a-SM-5L3EB 21.8
GTEX-14BIM-0011-R5b-SM-5S2RM 21.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 21.7
GTEX-OXRN-0011-R5A-SM-2I5EF 21.6
GTEX-13X6K-0011-R5b-SM-5PNUE 21.4
GTEX-12ZZX-0011-R5a-SM-5HL89 21.3
GTEX-ZE7O-0011-R5a-SM-57WBO 21.3
GTEX-13OVL-0011-R5b-SM-5L3FU 21.2
GTEX-145LS-0011-R5a-SM-5SI65 21.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 21.0
GTEX-13FXS-0011-R5b-SM-5LZYE 21.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 21.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 20.9
GTEX-12WSC-0011-R5b-SM-5CVNS 20.6
GTEX-13SLX-0011-R5a-SM-5O9BV 20.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 20.4
GTEX-YFC4-0011-R5a-SM-4RGLR 20.4
GTEX-11WQC-0011-R5a-SM-5BC74 20.3
GTEX-WL46-0011-R5A-SM-3LK6V 20.3
GTEX-11OF3-0011-R5a-SM-57WB4 20.0
GTEX-13NYB-0011-R5a-SM-5MR45 20.0
GTEX-145MH-0011-R5a-SM-5P9JT 19.9
GTEX-12WSF-0011-R5a-SM-5HL8K 19.8
GTEX-ZUA1-0011-R5b-SM-51MTG 19.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 19.6
GTEX-RVPU-0011-R5A-SM-2XCAD 19.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 19.6
GTEX-13OW7-0011-R5b-SM-5O9DM 19.5
GTEX-14ABY-0011-R5b-SM-5SI7B 19.4
GTEX-ZXG5-0011-R5b-SM-57WBN 19.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 19.3
GTEX-13CIG-0011-R5b-SM-5L3F2 19.3
GTEX-13O3O-0011-R5b-SM-5KM44 19.3
GTEX-13OVH-0011-R5b-SM-5KM4L 19.3
GTEX-13X6J-0011-R5b-SM-5PNWT 19.3
GTEX-139TS-0011-R5b-SM-5J2MZ 19.2
GTEX-TSE9-0011-R5A-SM-3DB7J 18.9
GTEX-Z93S-0011-R5b-SM-4RGNI 18.9
GTEX-1313W-0011-R5b-SM-5L3EP 18.8
GTEX-X585-0011-R5A-SM-46MVI 18.8
GTEX-12WSD-0011-R5b-SM-5CVNG 18.7
GTEX-13FLW-0011-R5a-SM-5LZX6 18.7
GTEX-139T8-0011-R5b-SM-5J1MO 18.4
GTEX-11NV4-0011-R5a-SM-5NQ88 18.0
GTEX-13VXU-0011-R5a-SM-5O9D7 18.0
GTEX-13S7M-0011-R5b-SM-5P9HS 17.8
GTEX-XOTO-0011-R5A-SM-4B657 17.3
GTEX-1399T-0011-R5b-SM-5IJDK 17.2
GTEX-ZV68-0011-R5a-SM-4YCDW 17.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 16.9
GTEX-12WSH-0011-R5b-SM-5P9F3 16.4
GTEX-11UD1-0011-R5b-SM-5P9FP 16.3
GTEX-13112-0011-R5b-SM-5DUV8 16.1
GTEX-144GL-0011-R5b-SM-5PNUJ 16.1
GTEX-14BIN-0011-R5b-SM-5SI78 15.6
GTEX-13FHP-0011-R5b-SM-5LZY2 15.1
GTEX-ZVT3-0011-R5a-SM-51MSI 15.0
GTEX-S7PM-0011-R5A-SM-3NM8G 14.6
GTEX-YJ89-0011-R5a-SM-4V6GM 14.0
GTEX-1477Z-0011-R5b-SM-5PNUO 13.2
GTEX-13CF2-0011-R5a-SM-5LZWS 12.9
GTEX-145MG-0011-R5b-SM-5S2VU 11.1
GTEX-13NZA-0011-R5b-SM-5KM4K 9.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

75.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 75.1
FF:10164-103B2 76 years, female 116.6
FF:10379-105H1 89 years, female 33.6

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