Cell atlas - FAM9C - The Human Protein Atlas

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FAM9C

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	FAM9C
Gene description	Family with sequence similarity 9, member C
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	4
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Cell line enriched (AN3-CA)
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enriched (AN3-CA) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	FAM9C (HGNC Symbol)
Synonyms	TEX39C
Description	Family with sequence similarity 9, member C (HGNC Symbol)
Entrez gene summary	This gene is a member of a gene family which arose through duplication on the X chromosome. The encoded protein may be localized to the nucleus as the protein contains several nuclear localization signals, and has similarity to a synaptonemal complex protein. [provided by RefSeq, Aug 2011]
Chromosome	X
Cytoband	p22.2
Chromosome location (bp)	13035618 - 13044682
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000187268 (version 83.38)
Entrez gene	171484
UniProt	Q8IZT9 (UniProt - Evidence at protein level)
neXtProt	NX_Q8IZT9
Antibodypedia	FAM9C antibodies

PROTEIN BROWSER

FAM9C-001	FAM9C-002	FAM9C-003	FAM9C-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM9C-001 ENSP00000369999 ENST00000380625	Q8IZT9 [Direct mapping] Protein FAM9C A0A024RBW5 [Target identity:100%; Query identity:100%] Family with sequence similarity 9, member C, isoform CRA_b Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0007286 [spermatid development] Show all	166 aa 19.2 kDa	No	0
FAM9C-002 ENSP00000409506 ENST00000438997	H7C346 [Direct mapping] Protein FAM9C Show all	Predicted intracellular proteins Show all	GO:0005634 [nucleus] GO:0007286 [spermatid development] Show all	126 aa 14.7 kDa	No	0
FAM9C-003 ENSP00000334430 ENST00000333995	Q8IZT9 [Direct mapping] Protein FAM9C A0A024RBW5 [Target identity:100%; Query identity:100%] Family with sequence similarity 9, member C, isoform CRA_b Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0007286 [spermatid development] Show all	166 aa 19.2 kDa	No	0
FAM9C-201 ENSP00000439185 ENST00000542843	G3V1I3 [Direct mapping] Family with sequence similarity 9, member C, isoform CRA_a; Protein FAM9C Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005634 [nucleus] GO:0007286 [spermatid development] GO:0016021 [integral component of membrane] Show all	128 aa 14.8 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.