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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.2TPM
GTEx:9.4RPKM
FANTOM5:7.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA040090

  

Adipocytes

 Low  

Chondrocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA040090

  

Adipocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

10.2
N/A Female, age 80
Sample 1
TPM: 21.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 10.9
N/A Female, age 57
Sample 3
TPM: 11.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 2.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 4.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

9.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 8.3
Samples: 350

Max RPKM: 36.3
Min RPKM: 1.4
Std RPKM: 3.9
Median RPKM: 7.4
GTEX-1269C-2726-SM-5EGJ4 36.3
GTEX-13PLJ-0126-SM-5L3HU 25.8
GTEX-13FTY-0626-SM-5L3F8 25.1
GTEX-12WSB-0226-SM-5GCOR 21.1
GTEX-Y111-0226-SM-4SOIW 18.7
GTEX-113IC-0226-SM-5HL5C 18.0
GTEX-13OW6-0526-SM-5L3HY 18.0
GTEX-SJXC-0226-SM-2XCDU 17.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.0
Samples: 227

Max RPKM: 36
Min RPKM: 2.2
Std RPKM: 6.2
Median RPKM: 9.6
GTEX-XLM4-1026-SM-4AT51 36.0
GTEX-12WSC-1726-SM-5GCN3 34.1
GTEX-13NZ9-2026-SM-5KM1U 29.4
GTEX-XBEC-1826-SM-4QASN 28.2
GTEX-ZAB5-1126-SM-5Q5AD 28.1
GTEX-139TU-1426-SM-5LZY9 26.9
GTEX-11DXY-0326-SM-5H12F 25.9
GTEX-13G51-0526-SM-5IJCQ 25.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

7.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 7.9
FF:10010-101C1 65,65,76 years, mixed 7.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.