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Gene name

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In atlas

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Method

Validation

Method

Validation

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Expression

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Specificity

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Detectable

Cell line

Detectable

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Score

Score

Antibodies

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PLSCR1
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TISSUE ATLAS PRIMARY DATA STOMACH

GENE/PROTEIN

Antibody validation


Dictionary

Stomach, lower
Stomach, upper

Tissue proteome

Stomach

STOMACH - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:39.9TPM
GTEx:11.9RPKM

STOMACH 1 - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody CAB070421

 

Glandular cells

Not detected  
 
 
 

STOMACH 2 - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody CAB070421

 

Glandular cells

Not detected  
 
 
 

STOMACH - HPA RNA-seq

Average TPM

39.9

overview Female, age 33
Sample 1
TPM: 26.3
Cell types%
Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35
N/A Male, age 82
Sample 2
TPM: 52.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30
overview Male, age 71
Sample 3
TPM: 55.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45
overview Female, age 66
Sample 4
TPM: 25.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seq

Average RPKM

11.9

GTEx sample id

RPKM

 

Stomach

Stomach
RPKM: 11.9
Samples: 193

Max RPKM: 55.9
Min RPKM: 3.3
Std RPKM: 7.9
Median RPKM: 9.5
GTEX-WHPG-0426-SM-4M1XW 55.9
GTEX-11WQK-2626-SM-5EQ4K 54.0
GTEX-SIU7-1426-SM-4BRWT 42.0
GTEX-132AR-2426-SM-5IFFD 31.0
GTEX-ZYVF-2726-SM-5GID4 30.2
GTEX-144GM-1726-SM-5O9AS 28.8
GTEX-ZE7O-3026-SM-51MS4 28.4
GTEX-13QJ3-2726-SM-5SI6L 28.0
GTEX-12WSD-2326-SM-59HKQ 27.8
GTEX-13N1W-2026-SM-5K7YU 25.7
GTEX-Y114-1226-SM-4TT88 25.2
GTEX-12C56-0526-SM-5FQST 25.1
GTEX-R55C-1026-SM-48FCM 25.0
GTEX-P4QT-1526-SM-3NMCT 24.2
GTEX-ZVT3-2126-SM-59HL2 23.7
GTEX-POMQ-0826-SM-3P61H 23.0
GTEX-11NUK-2426-SM-5BC4U 22.7
GTEX-117YW-2226-SM-5N9DB 22.6
GTEX-1339X-1426-SM-5K7YO 22.5
GTEX-131XE-2226-SM-5PNYX 21.3
GTEX-U4B1-1026-SM-4DXT1 21.2
GTEX-XV7Q-1326-SM-4BRWM 21.2
GTEX-UPK5-2126-SM-4JBJK 20.8
GTEX-11P82-0726-SM-5PNYL 20.5
GTEX-YJ8A-1526-SM-5P9FT 20.1
GTEX-11TT1-0726-SM-5GU5A 19.6
GTEX-13O61-1126-SM-5L3FI 19.6
GTEX-11EQ9-1226-SM-5987E 19.0
GTEX-QMRM-1126-SM-447BN 19.0
GTEX-Q2AH-1126-SM-48TZM 18.9
GTEX-13PVQ-2126-SM-5L3FW 18.8
GTEX-13111-1226-SM-5GCNC 18.0
GTEX-R55G-1126-SM-48FDG 17.5
GTEX-ZPIC-2026-SM-57WG3 17.4
GTEX-145ME-1026-SM-5O9B4 17.2
GTEX-T8EM-1226-SM-4DM5J 16.8
GTEX-QDVJ-1426-SM-48U1Y 16.4
GTEX-12BJ1-1726-SM-5HL9B 16.0
GTEX-13X6H-1626-SM-5Q5CT 16.0
GTEX-12WSJ-0926-SM-5P9JD 15.8
GTEX-R55D-1526-SM-48FEJ 15.7
GTEX-139YR-1926-SM-5LZXM 15.6
GTEX-11EI6-2426-SM-5PNVS 15.5
GTEX-SNOS-0826-SM-4DM5N 15.5
GTEX-UJHI-1026-SM-4IHJP 15.5
GTEX-T5JC-1926-SM-4DM6Q 15.4
GTEX-Y3I4-1626-SM-4TT7W 15.4
GTEX-ZTX8-0426-SM-59HLG 15.2
GTEX-TKQ2-0926-SM-4DXU5 15.0
GTEX-WFJO-1126-SM-4LVLZ 15.0
GTEX-Y5LM-1326-SM-5RQIS 14.5
GTEX-13OVI-2426-SM-5KM4J 14.4
GTEX-QDVN-1226-SM-48TZ5 14.4
GTEX-PWOO-1226-SM-48TCO 14.0
GTEX-14BMV-2226-SM-5RQHX 13.9
GTEX-QCQG-0526-SM-48U2A 13.9
GTEX-Y9LG-1026-SM-5IFJN 13.6
GTEX-13QBU-1126-SM-5LU44 13.4
GTEX-146FH-2126-SM-5SI9U 13.4
GTEX-XAJ8-0326-SM-47JYI 13.1
GTEX-13RTK-0226-SM-5RQHR 13.0
GTEX-S4P3-0726-SM-4AD57 13.0
GTEX-OHPK-1526-SM-3MJGM 12.9
GTEX-U8T8-1226-SM-4E3IH 12.7
GTEX-Y3IK-1426-SM-4YCES 12.6
GTEX-13S7M-1826-SM-5RQK6 12.5
GTEX-S7SF-0626-SM-4AD4V 12.5
GTEX-13CF3-1926-SM-5K7WF 12.3
GTEX-13OW6-2526-SM-5IJEC 12.3
GTEX-QLQ7-0826-SM-447B3 12.3
GTEX-QXCU-1926-SM-48FE4 12.1
GTEX-133LE-1326-SM-5IFGO 11.6
GTEX-P4PQ-1526-SM-3NMCK 11.6
GTEX-SNMC-0626-SM-4DM6H 11.6
GTEX-XBEW-1826-SM-4RTWX 11.6
GTEX-117YX-1026-SM-5H11V 11.5
GTEX-139D8-2326-SM-5IFGE 11.5
GTEX-145MO-2226-SM-5Q5BN 11.4
GTEX-14BMU-1126-SM-5RQJ8 11.2
GTEX-ZVP2-1626-SM-5GU5D 10.9
GTEX-11EM3-1026-SM-5A5KL 10.8
GTEX-ZV6S-0926-SM-57WGB 10.8
GTEX-V1D1-1726-SM-4JBHB 10.7
GTEX-1399U-1626-SM-5P9J3 10.6
GTEX-131XG-1226-SM-5EGH9 10.4
GTEX-13FTW-1726-SM-5KM2B 10.3
GTEX-PLZ6-0826-SM-3P61K 10.3
GTEX-VJYA-1026-SM-4KL21 10.3
GTEX-11P7K-1726-SM-5GU6F 10.2
GTEX-Y8E4-1526-SM-4WWDI 10.2
GTEX-1211K-1426-SM-5FQTF 10.1
GTEX-11I78-1726-SM-5A5M3 10.0
GTEX-13O3Q-2126-SM-5KM4C 9.7
GTEX-WFG7-1326-SM-4LMK1 9.7
GTEX-11DXX-1326-SM-5GIDZ 9.5
GTEX-11VI4-0326-SM-5EQ6L 9.5
GTEX-13U4I-2526-SM-5SI8Z 9.5
GTEX-146FR-2026-SM-5NQAI 9.5
GTEX-RU1J-0526-SM-46MUT 9.5
GTEX-13FTX-0726-SM-5N9BI 9.4
GTEX-OIZH-1526-SM-3NB1J 9.4
GTEX-P78B-1826-SM-3P5YX 9.4
GTEX-WH7G-1526-SM-4LVMX 9.4
GTEX-ZY6K-0726-SM-5A5L8 9.4
GTEX-S4Q7-0726-SM-4AD5F 9.3
GTEX-WEY5-1226-SM-4LMIQ 9.2
GTEX-OOBJ-1526-SM-3NB1Q 9.1
GTEX-PWN1-1526-SM-48TDA 9.1
GTEX-131XF-1226-SM-5HL8V 9.0
GTEX-ZQUD-0826-SM-57WDQ 9.0
GTEX-132QS-1826-SM-5IFFN 8.8
GTEX-S4Z8-1226-SM-4AD6W 8.8
GTEX-YEC4-1426-SM-5IFHS 8.5
GTEX-ZF2S-1426-SM-57WET 8.5
GTEX-WHWD-1426-SM-4OORU 8.4
GTEX-ZZPU-1426-SM-5GZZ6 8.4
GTEX-13113-0726-SM-5LZUF 8.3
GTEX-TKQ1-0526-SM-4DXTG 8.2
GTEX-RTLS-2626-SM-46MUJ 8.1
GTEX-1122O-1926-SM-5EGIQ 7.8
GTEX-11GSP-2126-SM-5HL5E 7.8
GTEX-UPIC-1826-SM-4IHKC 7.8
GTEX-YFCO-0826-SM-5LUAG 7.8
GTEX-111YS-1126-SM-5GZYQ 7.7
GTEX-12WSK-1426-SM-5CVNN 7.7
GTEX-ZYY3-1726-SM-5EGH3 7.7
GTEX-13FH7-1026-SM-5IJGF 7.6
GTEX-Q2AI-0826-SM-48TZO 7.6
GTEX-TMMY-1626-SM-4DXTY 7.6
GTEX-WFG8-1326-SM-4LVN3 7.6
GTEX-111CU-0926-SM-5EGIK 7.4
GTEX-T6MO-0726-SM-4DM58 7.3
GTEX-RM2N-0826-SM-48FD3 7.2
GTEX-U3ZN-2026-SM-4DXUC 7.1
GTEX-S4UY-1626-SM-4AD55 7.0
GTEX-WZTO-2126-SM-4PQYW 6.9
GTEX-XPVG-1526-SM-4B66C 6.8
GTEX-ZVZP-1726-SM-5GZWY 6.8
GTEX-ZZ64-0426-SM-5E43F 6.7
GTEX-S3XE-1026-SM-4AD4O 6.6
GTEX-YEC3-1426-101806-SM-5PNXX 6.6
GTEX-145MN-1326-SM-5NQ9S 6.5
GTEX-PWCY-0926-SM-48TD7 6.5
GTEX-XUJ4-1226-SM-4BOPD 6.5
GTEX-ZXES-1426-SM-5NQ8S 6.5
GTEX-Y8LW-0826-SM-4WWDO 6.4
GTEX-ZA64-0826-SM-5HL9U 6.3
GTEX-1399S-1626-SM-5P9GI 6.2
GTEX-144GN-1226-SM-5O991 6.2
GTEX-PW2O-1226-SM-48TCH 6.2
GTEX-XBED-1226-SM-4AT5V 6.2
GTEX-ZYFG-1326-SM-5GICJ 6.2
GTEX-XXEK-0826-SM-4BRWG 6.1
GTEX-QV31-0626-SM-447C5 6.0
GTEX-S95S-0826-SM-4B64N 6.0
GTEX-S341-0626-SM-4AD5T 5.9
GTEX-ZLFU-1326-SM-4WWET 5.9
GTEX-P4PP-1526-SM-3P61M 5.8
GTEX-ZLV1-0826-SM-4WWEQ 5.8
GTEX-13D11-2126-SM-5IFH2 5.7
GTEX-Q734-1026-SM-48U16 5.6
GTEX-WRHK-0626-SM-4MVOE 5.5
GTEX-QLQW-0726-SM-447AA 5.4
GTEX-Y5V6-1326-SM-4VDTF 5.3
GTEX-ZAB4-1526-SM-5CVN7 5.3
GTEX-ZP4G-1226-SM-4WWCJ 5.3
GTEX-ZPU1-1626-SM-4WWB2 5.3
GTEX-R53T-1226-SM-48FCT 5.2
GTEX-1399R-1126-SM-5IFIO 5.1
GTEX-ZV7C-1626-SM-5NQ7E 5.1
GTEX-ZVT2-1626-SM-51MRC 5.1
GTEX-13O21-0926-SM-5IFGT 5.0
GTEX-145LT-1426-SM-5O9B3 5.0
GTEX-NFK9-1526-SM-3LK7B 5.0
GTEX-ZDYS-1926-SM-5HL59 5.0
GTEX-12696-1726-SM-5EQLH 4.9
GTEX-QV44-1226-SM-4R1KE 4.9
GTEX-WFON-1126-SM-4LVMA 4.8
GTEX-XQ8I-2026-SM-4BOOL 4.7
GTEX-SUCS-0926-SM-4DM4Z 4.6
GTEX-O5YW-1526-SM-3MJGL 4.5
GTEX-OXRK-1626-SM-3NB17 4.5
GTEX-T5JW-0926-SM-4DM5K 4.3
GTEX-V955-1326-SM-4JBHR 4.3
GTEX-X15G-1126-SM-4PQZG 4.3
GTEX-W5WG-1726-SM-4LMI5 4.2
GTEX-12WSG-2026-SM-5FQUU 4.0
GTEX-11NSD-1426-SM-5HL67 3.8
GTEX-RWS6-0926-SM-47JXE 3.7
GTEX-XUZC-0726-SM-4BOPH 3.6
GTEX-ZT9W-1526-SM-4YCDE 3.4
GTEX-PX3G-1526-SM-48U11 3.3
GTEX-UJMC-1226-SM-4IHLI 3.3
Show all

STOMACH - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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