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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:137.5TPM
GTEx:110.9RPKM
FANTOM5:83.3Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA000843

 

Adipocytes

High  

Glandular cells

High  

Myoepithelial cells

High  
 
 
 

BREAST - HPA RNA-seq

Average TPM

137.5

overview Female, age 52
Sample 1
TPM: 132.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 116.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 217.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 83.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

110.9

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 110.9
Samples: 214

Max RPKM: 456.9
Min RPKM: 13.5
Std RPKM: 68.7
Median RPKM: 97.4
GTEX-11EM3-1326-SM-5N9C6 456.9
GTEX-X15G-1626-SM-3NMB3 325.5
GTEX-U412-1826-SM-4DXTJ 321.7
GTEX-ZXES-0826-SM-5E43C 309.4
GTEX-1269C-2426-SM-5FQSN 283.3
GTEX-13FTY-2226-SM-5J1ND 281.7
GTEX-Y114-2026-SM-4TT7L 270.3
GTEX-VJWN-0726-SM-3GIJ8 266.4
GTEX-11GS4-2126-SM-5A5KR 253.2
GTEX-11P7K-0726-SM-5EGKX 241.3
GTEX-131XW-0726-SM-5EGK3 238.1
GTEX-WYVS-1726-SM-3NMAY 232.1
GTEX-ZC5H-2626-SM-5J2MG 229.0
GTEX-S4UY-0726-SM-4AD6X 224.4
GTEX-147F4-2826-SM-5NQBN 222.4
GTEX-XOT4-0726-SM-4GIAW 220.5
GTEX-11PRG-0826-SM-5EQ6A 220.1
GTEX-ZU9S-1926-SM-5NQBP 219.2
GTEX-T2IS-1526-SM-32QPR 216.7
GTEX-R55F-1726-SM-2TF4R 212.1
GTEX-ZF2S-2026-SM-5E461 207.9
GTEX-Y8LW-1626-SM-5IFHX 201.7
GTEX-X4EP-2926-SM-3P5YQ 196.7
GTEX-T6MN-0726-SM-32PML 196.2
GTEX-ZTX8-1226-SM-4YCE9 195.5
GTEX-ZVTK-0326-SM-51MRR 188.4
GTEX-YFC4-1426-SM-5IFJG 188.3
GTEX-XBED-1626-SM-47JYN 186.8
GTEX-Q2AG-0326-SM-48U1O 184.0
GTEX-12ZZX-1126-SM-5EGKB 182.9
GTEX-13O3P-0826-SM-5L3DH 182.9
GTEX-13NZB-2126-SM-5MR4Y 182.3
GTEX-UJHI-1426-SM-3DB9C 181.7
GTEX-T5JC-2126-SM-32PMO 180.8
GTEX-131YS-0626-SM-5EGKL 172.4
GTEX-RU72-0626-SM-46MUI 172.0
GTEX-13NZ9-1026-SM-5MR5K 168.2
GTEX-11EMC-2026-SM-5A5JV 167.2
GTEX-13PL6-2926-SM-5L3I2 166.4
GTEX-145MN-1926-SM-5SIAI 165.0
GTEX-T5JW-2026-SM-4DM63 164.3
GTEX-S4P3-1326-SM-4AD6V 163.6
GTEX-132Q8-1426-SM-5EGK7 163.4
GTEX-11EI6-0626-SM-5985T 163.3
GTEX-111YS-1926-SM-5GICC 162.6
GTEX-ZF29-1926-SM-5S2P1 160.8
GTEX-TML8-1226-SM-32QON 157.5
GTEX-ZV7C-1826-SM-5NQ83 156.3
GTEX-13FHO-0826-SM-5L3E8 155.5
GTEX-145LT-0726-SM-5S2VM 149.4
GTEX-QEG5-0726-SM-4R1JQ 148.5
GTEX-S341-1526-SM-4AD6K 147.0
GTEX-XMD2-0926-SM-4WWEF 144.6
GTEX-WYBS-0926-SM-3NM94 144.3
GTEX-11DXW-0626-SM-5N9ER 143.9
GTEX-13QIC-2326-SM-5LU5N 142.9
GTEX-R3RS-0626-SM-48FE1 141.9
GTEX-13N11-1726-SM-5J1OJ 141.5
GTEX-11TT1-2126-SM-5GU5Y 139.8
GTEX-WYJK-1326-SM-3NB2T 139.7
GTEX-ZVE2-1226-SM-5NQ8R 138.9
GTEX-Y3IK-2326-SM-4WWDT 138.1
GTEX-WXYG-2226-SM-4E3IM 138.0
GTEX-11WQC-1726-SM-5GU4W 137.7
GTEX-ZDYS-1126-SM-5K7UB 131.7
GTEX-1399U-1826-SM-5PNZ1 131.3
GTEX-11P81-1926-SM-5BC53 130.6
GTEX-WI4N-1426-SM-3LK7H 130.3
GTEX-Y3I4-1526-SM-4TT7K 130.0
GTEX-Y111-2026-SM-4SOJA 128.2
GTEX-SIU7-1626-SM-4BRUK 128.1
GTEX-U3ZN-1926-SM-4DXSG 126.1
GTEX-13FTW-1426-SM-5LZWZ 125.0
GTEX-13OW5-2226-SM-5L3HC 124.9
GTEX-ZVT2-1826-SM-5NQ8W 124.0
GTEX-SE5C-2126-SM-4BRUJ 122.0
GTEX-XUJ4-1926-SM-4BOOV 122.0
GTEX-139T8-0826-SM-5L3DE 121.9
GTEX-ZQUD-1926-SM-51MSA 118.0
GTEX-14ABY-2126-SM-5QGQZ 116.1
GTEX-ZZPU-0626-SM-5E43T 115.8
GTEX-133LE-1726-SM-5K7VQ 115.7
GTEX-1314G-1226-SM-5BC6D 114.2
GTEX-13CF2-2026-SM-5K7VI 114.0
GTEX-ZLV1-1426-SM-4WWES 114.0
GTEX-13NZ8-0126-SM-5IJCT 113.9
GTEX-WRHU-0326-SM-3MJFY 112.9
GTEX-ZVZQ-0826-SM-51MRF 112.9
GTEX-117YX-1426-SM-5H12H 111.5
GTEX-ZEX8-2226-SM-57WC6 111.0
GTEX-XUZC-1626-SM-4BRVP 109.9
GTEX-XYKS-1326-SM-4BRUN 108.9
GTEX-TKQ1-0226-SM-33HB5 108.2
GTEX-13O3O-0826-SM-5K7WE 106.6
GTEX-T2YK-2226-SM-32QPT 106.4
GTEX-ZAJG-0626-SM-5HL8X 105.0
GTEX-Y5LM-1726-SM-4VDSX 104.9
GTEX-ZF3C-2326-SM-5S2MZ 104.1
GTEX-RWS6-1926-SM-47JXY 103.6
GTEX-TMMY-0726-SM-33HBE 102.4
GTEX-WOFL-0826-SM-3MJG1 102.0
GTEX-ZTTD-1026-SM-51MRD 101.7
GTEX-139TU-0626-SM-5KM3X 101.3
GTEX-X4XY-0926-SM-4E3JD 101.3
GTEX-11LCK-2426-SM-5HL5F 100.5
GTEX-ZA64-1526-SM-5CVMD 99.0
GTEX-UPK5-2326-SM-3P5Z8 97.9
GTEX-S33H-0326-SM-4AD6N 97.0
GTEX-ZYW4-0826-SM-5GIDG 96.8
GTEX-13W3W-1226-SM-5LU4H 96.1
GTEX-146FH-0826-SM-5SI8T 95.2
GTEX-VUSG-2226-SM-4KKZO 94.6
GTEX-QDT8-0626-SM-48TYW 93.7
GTEX-S4Q7-1126-SM-4AD6R 91.8
GTEX-U3ZH-1426-SM-4DXSR 91.5
GTEX-14AS3-1626-SM-5S2OY 90.2
GTEX-ZDXO-0126-SM-5S2ND 89.7
GTEX-1313W-0826-SM-5EQ4T 89.3
GTEX-QEL4-2126-SM-447AE 88.1
GTEX-Y5V5-2126-SM-4WWFO 88.0
GTEX-13W46-0826-SM-5LU3H 87.9
GTEX-11DXZ-1926-SM-5GZZL 87.2
GTEX-1211K-1926-SM-5EQLB 86.0
GTEX-12WSK-2226-SM-5GCO5 84.8
GTEX-12BJ1-1826-SM-5HL9N 84.3
GTEX-ZPIC-1126-SM-5BC7F 83.9
GTEX-ZY6K-1626-SM-5GZWV 82.9
GTEX-13O3Q-2226-SM-5KM4O 82.8
GTEX-ZVT4-1026-SM-57WC4 82.7
GTEX-139T6-1626-SM-5PNYZ 82.1
GTEX-1192X-2326-SM-5987X 81.1
GTEX-ZV6S-1826-SM-5NQ8D 80.1
GTEX-12WSN-1326-SM-5GCNT 80.0
GTEX-145MO-0826-SM-5NQBL 77.9
GTEX-ZZ64-1226-SM-5E43R 72.8
GTEX-Y8E4-1626-SM-5S2MW 72.5
GTEX-132NY-0826-SM-5K7Y7 72.3
GTEX-ZYFC-0826-SM-5E44K 72.3
GTEX-XMD1-0826-SM-4AT52 72.0
GTEX-XMK1-1126-SM-4IHJ8 71.7
GTEX-YB5K-1626-SM-5IFIN 71.4
GTEX-ZDTT-2126-SM-5S2OJ 70.2
GTEX-PSDG-1626-SM-48TCQ 69.1
GTEX-T6MO-0326-SM-32QOK 69.1
GTEX-13D11-1026-SM-5IJFB 68.5
GTEX-13113-1726-SM-5GCOO 67.4
GTEX-QMRM-1626-SM-4R1KV 67.4
GTEX-1122O-1226-SM-5H113 66.7
GTEX-11NV4-2026-SM-5N9DG 66.3
GTEX-117XS-1926-SM-5GICO 66.1
GTEX-13CF3-2126-SM-5IFJP 64.8
GTEX-XUW1-2326-SM-4BOO5 63.7
GTEX-YJ8O-2226-SM-5IFHW 62.9
GTEX-QVJO-1826-SM-447C9 62.8
GTEX-11ZUS-0826-SM-5FQUY 62.4
GTEX-TKQ2-1826-SM-33HB2 61.0
GTEX-ZAB4-2526-SM-5HL8M 60.7
GTEX-S7SE-0826-SM-4AT4D 59.7
GTEX-ZUA1-1526-SM-59HLS 59.2
GTEX-Y9LG-1426-SM-5IFJZ 59.0
GTEX-X261-0626-SM-3NMD9 57.9
GTEX-12KS4-0126-SM-5Q5A5 57.6
GTEX-W5X1-2326-SM-3GIL6 57.4
GTEX-11OF3-1926-SM-59889 55.4
GTEX-XV7Q-2326-SM-4BRVZ 55.3
GTEX-R53T-1526-SM-48FEK 55.0
GTEX-ZYWO-2326-SM-5GZY4 54.5
GTEX-R55D-0826-SM-48FEA 54.1
GTEX-11GSO-1926-SM-5A5K3 53.5
GTEX-ZQG8-0726-SM-5P9H9 53.5
GTEX-ZYT6-0126-SM-5E45J 53.1
GTEX-WY7C-2726-SM-3NB3P 51.7
GTEX-12WSM-1726-SM-5BC6J 51.4
GTEX-13FTX-1126-SM-5N9EN 51.0
GTEX-11EQ9-1826-SM-5Q5AJ 50.7
GTEX-13OW8-0226-SM-5K7UP 50.2
GTEX-11O72-2126-SM-5N9FO 48.8
GTEX-144GL-2026-SM-5LU3O 48.8
GTEX-Y5V6-2126-SM-4WWFX 48.4
GTEX-1117F-2826-SM-5GZXL 47.7
GTEX-WFON-1826-SM-3GILG 47.1
GTEX-12WSB-0626-SM-59HJO 46.5
GTEX-11DXY-2326-SM-5GICW 45.4
GTEX-XQ3S-1326-SM-4BOPQ 45.2
GTEX-144GM-0926-SM-5O994 45.1
GTEX-YB5E-1726-SM-5IFJ3 45.0
GTEX-11ZTT-2326-SM-5EQLG 44.7
GTEX-11DZ1-0326-SM-5N9BN 44.4
GTEX-11ONC-2126-SM-5HL6E 42.6
GTEX-11NSD-0926-SM-5N9DR 42.1
GTEX-132AR-0826-SM-5EGK6 41.8
GTEX-U8XE-0826-SM-4E3J1 40.6
GTEX-YEC3-1026-SM-5IFI5 40.6
GTEX-S32W-2026-SM-4AD6E 39.9
GTEX-11I78-2226-SM-5PNYA 37.2
GTEX-YFCO-1826-SM-4W1YH 36.6
GTEX-UTHO-1026-SM-3GAF7 35.2
GTEX-14753-2426-SM-5LU8U 34.4
GTEX-REY6-2426-SM-48FF5 34.0
GTEX-13N1W-0626-SM-5MR4U 33.2
GTEX-XQ8I-2426-SM-4WAXY 33.2
GTEX-13O61-1826-SM-5KM4I 33.1
GTEX-13PVQ-1026-SM-5KM3M 30.8
GTEX-XGQ4-0926-SM-4AT4U 29.7
GTEX-14E6E-1326-SM-5S2NR 28.0
GTEX-ZLFU-2126-SM-4WWEV 27.2
GTEX-ZT9W-2026-SM-51MRA 26.6
GTEX-11TUW-1826-SM-5BC5D 25.9
GTEX-11P82-1326-SM-5HL62 23.7
GTEX-ZWKS-2826-SM-5NQ74 23.1
GTEX-145ME-1526-SM-5Q5F2 21.3
GTEX-RUSQ-2026-SM-4GIAK 15.2
GTEX-11WQK-2426-SM-5GU5C 14.4
GTEX-13S86-1226-SM-5S2OA 13.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

83.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 83.3
FF:10080-102A8 77 years, female 83.3

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