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H1F0
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:143.1TPM
GTEx:45.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glial cells:High
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody HPA000843

 

Endothelial cells

High  

Glial cells

High  

Neuronal cells

High  

Neuropil

High  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

143.1

N/A Male, age 5
Sample 1
TPM: 145.1
overview Female, age 40
Sample 2
TPM: 178.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 105.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

45.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 42.9
Samples: 114

Max RPKM: 95.3
Min RPKM: 24.8
Std RPKM: 10.9
Median RPKM: 40.7
GTEX-X585-3026-SM-46MWF 95.3
GTEX-11WQK-3026-SM-5EQL6 89.2
GTEX-13JVG-3126-SM-5L3FH 73.9
GTEX-11OF3-2926-SM-5HL78 72.5
GTEX-ZZPT-3026-SM-5GZXH 66.0
GTEX-13OVJ-2826-SM-5L3GW 63.2
GTEX-QVJO-1426-SM-2S1QY 62.5
GTEX-132Q8-3026-SM-5PNVG 60.6
GTEX-13FXS-3126-SM-5J2NN 57.3
GTEX-WZTO-2926-SM-3NM9I 55.6
GTEX-144FL-3026-SM-5O99C 54.9
GTEX-X4XX-3026-SM-3NMB2 54.5
GTEX-13NYC-2826-SM-5K7WR 53.4
GTEX-11DXY-3226-SM-5GIDE 50.8
GTEX-13PVQ-3026-SM-5SI93 50.6
GTEX-Z93S-2926-SM-57WB9 50.0
GTEX-13FHO-3026-SM-5J1O9 49.5
GTEX-1399T-3026-SM-5KLZC 48.9
GTEX-12ZZX-2926-SM-5GCOQ 48.5
GTEX-ZAK1-3026-SM-5S2MJ 48.5
GTEX-14BMV-3026-SM-5S2PQ 48.2
GTEX-11NUK-2926-SM-5A5MD 48.1
GTEX-13OW6-3026-SM-5J2MI 48.1
GTEX-117XS-3026-SM-5N9CA 48.0
GTEX-131YS-3126-SM-5KLYT 47.7
GTEX-13PL6-3126-SM-5LUAR 47.6
GTEX-WVLH-3026-SM-3MJG9 47.6
GTEX-13NYS-3126-SM-5KLYV 47.3
GTEX-12ZZY-3026-SM-5GCOU 47.0
GTEX-11PRG-2926-SM-5987A 46.8
GTEX-WHSE-3026-SM-3P5ZH 45.7
GTEX-11GSO-2926-SM-5HL73 45.6
GTEX-14ASI-3026-SM-5S2PN 45.5
GTEX-145MH-3026-SM-5Q5DZ 45.3
GTEX-N7MT-1126-SM-5SI7V 45.2
GTEX-T5JC-2426-SM-3NMDB 45.0
GTEX-11ZUS-2926-SM-5FQSL 44.6
GTEX-13QIC-2926-SM-5J2NF 44.6
GTEX-YJ89-3026-SM-5IFJI 44.3
GTEX-13NYB-3026-SM-5IJD7 44.0
GTEX-ZE7O-3126-SM-5HL5X 43.6
GTEX-11EI6-3026-SM-5GZZO 43.4
GTEX-T6MN-2626-SM-32PMQ 43.3
GTEX-12WSC-3026-SM-5GCNF 43.2
GTEX-13X6J-3026-SM-5Q5CU 43.2
GTEX-QVUS-2826-SM-3GADB 42.7
GTEX-145LS-3126-SM-5Q5BY 42.6
GTEX-ZUA1-3026-SM-59HJC 42.6
GTEX-1313W-3126-SM-5LZUI 42.5
GTEX-RU72-3026-SM-5SI7Y 42.5
GTEX-12WSD-3126-SM-5HL7P 42.3
GTEX-11DXW-1126-SM-5H12Q 42.2
GTEX-13VXU-2926-SM-5LU5C 42.2
GTEX-WL46-2926-SM-3LK82 41.8
GTEX-Y111-2726-SM-4TT3N 41.1
GTEX-Y8DK-0826-SM-4TT3T 40.9
GTEX-13O3Q-2926-SM-5KM45 40.8
GTEX-RNOR-2326-SM-2TF4I 40.7
GTEX-111FC-3126-SM-5GZZ2 40.5
GTEX-13G51-3026-SM-5IJB8 40.5
GTEX-13OW7-3026-SM-5L3GY 40.5
GTEX-11NV4-2126-SM-5N9DS 40.4
GTEX-R55F-1326-SM-5S2V4 40.4
GTEX-11TTK-2926-SM-5PNYP 40.3
GTEX-145MG-3026-SM-5RQJA 40.3
GTEX-XOTO-3026-SM-4B65M 40.3
GTEX-13OVH-3026-SM-5MR4N 40.1
GTEX-13O3O-3126-SM-5KM3H 40.0
GTEX-13JUV-2926-SM-5LZX7 39.7
GTEX-13FHP-3026-SM-5IJBS 39.6
GTEX-145MF-2726-SM-5O995 39.5
GTEX-12ZZW-2926-SM-5LZUP 39.3
GTEX-11EMC-3226-SM-5EGKW 39.2
GTEX-13FLW-1426-SM-5K7YE 39.2
GTEX-144GL-3026-SM-5Q5CW 39.2
GTEX-TSE9-3026-SM-3DB76 39.2
GTEX-PVOW-2526-SM-2XCF7 38.7
GTEX-1128S-2726-SM-5H12C 38.4
GTEX-12ZZZ-3026-SM-5BC67 38.4
GTEX-ZYFD-3026-SM-5E44C 38.4
GTEX-12WSA-2926-SM-5EQ4D 38.3
GTEX-13S7M-3126-SM-5RQJQ 38.0
GTEX-T2IS-3026-SM-32QPM 37.6
GTEX-12126-1026-SM-5P9JJ 37.4
GTEX-YFC4-3126-SM-5PNV6 37.1
GTEX-11ONC-2926-SM-5P9JM 36.8
GTEX-UTHO-3026-SM-3GAFB 36.7
GTEX-1192X-3126-SM-5N9BY 35.6
GTEX-XLM4-3026-SM-4AT6L 35.6
GTEX-147GR-3026-SM-5S2ML 34.8
GTEX-13SLX-3126-SM-5S2Q5 34.7
GTEX-11GS4-3126-SM-5A5LH 34.6
GTEX-11GSP-3226-SM-5986O 34.5
GTEX-131XW-3126-SM-5LZUC 34.5
GTEX-13X6K-2926-SM-5Q5D5 34.5
GTEX-13OW8-2826-SM-5L3GC 34.1
GTEX-NPJ8-1526-SM-2D7VU 34.0
GTEX-WWYW-3126-SM-3NB39 34.0
GTEX-11OC5-0726-SM-5P9JK 33.8
GTEX-Q2AG-2926-SM-2HMJ3 33.8
GTEX-14A5I-2926-SM-5Q5CQ 33.7
GTEX-QMR6-1426-SM-32PLA 33.7
GTEX-ZVT3-3026-SM-5E43N 33.2
GTEX-1117F-3226-SM-5N9CT 33.1
GTEX-QDT8-2926-SM-32PKC 32.8
GTEX-11O72-2926-SM-5BC4V 32.4
GTEX-NPJ7-2726-SM-2I3FT 31.7
GTEX-PWO3-0926-SM-2I5EY 29.2
GTEX-139T8-1026-SM-5J2MC 28.5
GTEX-ZAJG-3126-SM-5HL9J 28.2
GTEX-12WSH-3026-SM-5CVNI 26.8
GTEX-1445S-3026-SM-5O9BR 26.0
GTEX-OXRN-2426-SM-2I5EQ 26.0
GTEX-13IVO-2926-SM-5L3CZ 24.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 48.5
Samples: 108

Max RPKM: 210
Min RPKM: 18.6
Std RPKM: 19.9
Median RPKM: 47.6
GTEX-X4EP-0011-R10B-SM-4QASJ 210.0
GTEX-11WQK-0011-R10a-SM-5BC6R 92.5
GTEX-X585-0011-R10A-SM-46MUY 83.7
GTEX-11ZUS-0011-R10b-SM-5BC79 79.9
GTEX-13JVG-0011-R10b-SM-5KM2P 78.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 72.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 67.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 66.9
GTEX-13N1W-0011-R10b-SM-5MR4H 62.7
GTEX-13NYB-0011-R10a-SM-5KM43 61.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 59.9
GTEX-131XH-0011-R10a-SM-5EGLJ 59.8
GTEX-13X6J-0011-R10b-SM-5PNWA 59.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 59.1
GTEX-131YS-0011-R10b-SM-5EQ5N 56.6
GTEX-T6MN-0011-R10A-SM-32QP7 56.4
GTEX-13OW6-0011-R10a-SM-5L3HE 56.2
GTEX-13X6I-0011-R10a-SM-5PNWI 56.2
GTEX-13JUV-0011-R10b-SM-5LZXR 55.9
GTEX-WZTO-0011-R10B-SM-4E3KB 55.4
GTEX-145MG-0011-R10a-SM-5PNWG 55.1
GTEX-X4XX-0011-R10B-SM-46MWO 55.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 54.8
GTEX-13QIC-0011-R10a-SM-5O9C7 54.8
GTEX-Z93S-0011-R10a-SM-4RGNM 54.0
GTEX-T5JC-0011-R10A-SM-32PM2 53.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 53.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 53.5
GTEX-N7MS-0011-R10A-SM-2HMJK 53.4
GTEX-12WSM-0011-R10a-SM-5DUWV 53.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 53.0
GTEX-12WSF-0011-R10a-SM-5LZVH 52.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 52.3
GTEX-13O3Q-0011-R10b-SM-5KM39 52.1
GTEX-145MH-0011-R10b-SM-5PNUK 52.1
GTEX-WVLH-0011-R10A-SM-3MJFM 52.0
GTEX-13G51-0011-R10b-SM-5LZYF 51.7
GTEX-14BIN-0011-R10a-SM-5S2UA 51.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 51.3
GTEX-11H98-0011-R10b-SM-5NQ98 50.9
GTEX-NL3H-0011-R10A-SM-2I3E9 50.5
GTEX-13NYS-0011-R10a-SM-5MR4S 50.4
GTEX-13FLW-0011-R10b-SM-5LZZF 50.0
GTEX-S7SE-0011-R10A-SM-2XCDF 50.0
GTEX-WL46-0011-R10A-SM-3MJFQ 49.9
GTEX-147F4-0011-R10b-SM-5S2WC 49.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 49.5
GTEX-ZUA1-0011-R10a-SM-51MT6 48.7
GTEX-YJ89-0011-R10a-SM-4SOK9 48.3
GTEX-12WSD-0011-R10b-SM-5GU79 48.2
GTEX-13CZV-0011-R10b-SM-5LZYD 48.1
GTEX-13FXS-0011-R10a-SM-5J2MA 47.8
GTEX-13OW7-0011-R10a-SM-5L3H3 47.7
GTEX-13OVL-0011-R10a-SM-5L3GS 47.6
GTEX-N7MT-0011-R10A-SM-2I3E1 47.6
GTEX-147GR-0011-R10b-SM-5S2UM 47.1
GTEX-13FHO-0011-R10b-SM-5J2MM 47.0
GTEX-1313W-0011-R10b-SM-5DUXA 46.8
GTEX-145LS-0011-R10a-SM-5PNUQ 46.7
GTEX-12WSE-0011-R10b-SM-5P9JV 45.9
GTEX-145LU-0011-R10a-SM-5PNWJ 45.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 44.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 44.6
GTEX-XLM4-0011-R10A-SM-4AT5P 44.4
GTEX-12WSA-0011-R10b-SM-5P9ET 44.2
GTEX-13OW8-0011-R10a-SM-5L3H6 43.6
GTEX-13S7M-0011-R10b-SM-5PNZB 43.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 43.5
GTEX-12WSC-0011-R10a-SM-5GU57 43.2
GTEX-TSE9-0011-R10A-SM-3DB7O 42.9
GTEX-XMD1-0011-R10A-SM-4AT4A 42.8
GTEX-14BIL-0011-R10a-SM-5SI75 42.7
GTEX-13SLW-0011-R10a-SM-5S2UI 42.5
GTEX-QMR6-0011-R10A-SM-32PKO 42.5
GTEX-ZF28-0011-R10a-SM-4WWEH 40.1
GTEX-139TS-0011-R10a-SM-5K7TU 40.0
GTEX-13X6K-0011-R10a-SM-5P9JR 40.0
GTEX-YFC4-0011-R10a-SM-4SOK5 40.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 39.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 39.4
GTEX-13SLX-0011-R10a-SM-5P9HV 39.3
GTEX-NL4W-0011-R10A-SM-2I3DY 39.0
GTEX-13O3O-0011-R10a-SM-5LUA9 38.9
GTEX-P44H-0011-R10A-SM-2XCEK 38.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 38.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 38.0
GTEX-14753-0011-R10b-SM-5S2WE 37.8
GTEX-12126-0011-R10b-SM-5BC6T 36.7
GTEX-ZXG5-0011-R10a-SM-57WDD 36.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 35.1
GTEX-13N2G-0011-R10a-SM-5MR34 35.0
GTEX-RVPU-0011-R10A-SM-2XCAH 34.9
GTEX-1477Z-0011-R10b-SM-5S2RF 34.6
GTEX-WWYW-0011-R10A-SM-3NB35 34.5
GTEX-ZVT3-0011-R10b-SM-57WB6 34.4
GTEX-11WQC-0011-R10a-SM-57WCT 33.4
GTEX-QVUS-0011-R10A-SM-3GIK3 33.4
GTEX-12WSH-0011-R10a-SM-5LZUS 32.5
GTEX-QDT8-0011-R10A-SM-32PKG 32.1
GTEX-13NZA-0011-R10b-SM-5KM54 31.6
GTEX-1445S-0011-R10a-SM-5PNWB 30.3
GTEX-OXRN-0011-R10A-SM-2I5GC 29.5
GTEX-ZV68-0011-R10a-SM-51MT7 27.3
GTEX-131XW-0011-R10a-SM-5DUVA 23.2
GTEX-X261-0011-R10B-SM-4E3JT 22.5
GTEX-13QJC-0011-R10a-SM-5SI63 21.9
GTEX-OXRO-0011-R10A-SM-2I5EH 19.6
GTEX-13IVO-0011-R10a-SM-5LZY3 18.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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