Expression of NIF3L1 in cancer - Summary

CANCER ATLAS

Gene description

NIF3 NGG1 interacting factor 3-like 1

Protein class

Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Testis cancer

STAINING SUMMARY

HPA036335	HPA036336	HPA061466

GENE INFORMATION
Gene name	NIF3L1 (HGNC Symbol)
Synonyms	ALS2CR1, CALS-7, MDS015
Description	NIF3 NGG1 interacting factor 3-like 1 (HGNC Symbol)
Entrez gene summary
Chromosome	2
Cytoband	q33.1
Chromosome location (bp)	200889327 - 200903930
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000196290 (version 83.38)
Entrez gene	60491
UniProt	Q9GZT8 (UniProt - Evidence at protein level)
neXtProt	NX_Q9GZT8
Antibodypedia	NIF3L1 antibodies

PROTEIN BROWSER

NIF3L1-001	NIF3L1-003	NIF3L1-004	NIF3L1-005	NIF3L1-007	NIF3L1-008	NIF3L1-009	NIF3L1-010	NIF3L1-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
NIF3L1-001 ENSP00000352711 ENST00000359683	Q9GZT8 [Direct mapping] NIF3-like protein 1 A0A024R3V5 [Target identity:100%; Query identity:100%] NIF3 NGG1 interacting factor 3-like 1 (S. pombe), isoform CRA_b Show all	Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0008134 [transcription factor binding] GO:0030182 [neuron differentiation] GO:0042802 [identical protein binding] GO:0045893 [positive regulation of transcription, DNA-templated] GO:1903507 [negative regulation of nucleic acid-templated transcription] Show all	350 aa 39 kDa	No	0
NIF3L1-003 ENSP00000387315 ENST00000409357	Q9GZT8 [Direct mapping] NIF3-like protein 1 A0A024R3V7 [Target identity:100%; Query identity:100%] NIF3 NGG1 interacting factor 3-like 1 (S. pombe), isoform CRA_a Show all	Predicted intracellular proteins Plasma proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0008134 [transcription factor binding] GO:0030182 [neuron differentiation] GO:0042802 [identical protein binding] GO:0045893 [positive regulation of transcription, DNA-templated] GO:1903507 [negative regulation of nucleic acid-templated transcription] Show all	377 aa 42 kDa	No	0
NIF3L1-004 ENSP00000386394 ENST00000409020	Q9GZT8 [Direct mapping] NIF3-like protein 1 A0A024R3V7 [Target identity:100%; Query identity:100%] NIF3 NGG1 interacting factor 3-like 1 (S. pombe), isoform CRA_a Show all	Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0008134 [transcription factor binding] GO:0030182 [neuron differentiation] GO:0042802 [identical protein binding] GO:0045893 [positive regulation of transcription, DNA-templated] GO:1903507 [negative regulation of nucleic acid-templated transcription] Show all	377 aa 42 kDa	No	0
NIF3L1-005 ENSP00000387021 ENST00000409588	Q9GZT8 [Direct mapping] NIF3-like protein 1 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT-SVM predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0008134 [transcription factor binding] GO:0030182 [neuron differentiation] GO:0042802 [identical protein binding] GO:0045893 [positive regulation of transcription, DNA-templated] GO:1903507 [negative regulation of nucleic acid-templated transcription] Show all	285 aa 32.2 kDa	No	1
NIF3L1-007 ENSP00000412761 ENST00000426253	E7EXA3 [Direct mapping] NIF3-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005739 [mitochondrion] Show all	209 aa 23.6 kDa	No	0
NIF3L1-008 ENSP00000394955 ENST00000454952	C9JN42 [Direct mapping] NIF3-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005739 [mitochondrion] Show all	163 aa 18.3 kDa	No	0
NIF3L1-009 ENSP00000387061 ENST00000409129	B8ZZI0 [Direct mapping] NIF3-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005739 [mitochondrion] Show all	162 aa 18.2 kDa	No	0
NIF3L1-010 ENSP00000399336 ENST00000436412	H7C1A8 [Direct mapping] NIF3-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005739 [mitochondrion] Show all	84 aa 8.7 kDa	No	0
NIF3L1-201 ENSP00000400787 ENST00000416651	Q6X734 [Direct mapping] NIF3-like protein 1; NIF3L1 isoform gamma Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005739 [mitochondrion] Show all	252 aa 28.4 kDa	No	0