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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:25.6RPKM
FANTOM5:27.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody CAB013066

 

Glial cells

Low  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

25.6

GTEx sample id

RPKM

20.425.631.26.442.70510152025303540
 
20.425.631.26.442.70510152025303540

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 25.6
Samples: 117

Max RPKM: 42.7
Min RPKM: 6.4
Std RPKM: 7.7
Median RPKM: 25.6
GTEX-WWYW-0011-R5A-SM-3NB3E 42.7
GTEX-WL46-0011-R5A-SM-3LK6V 41.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 38.8
GTEX-WZTO-0011-R5B-SM-3NMC5 38.4
GTEX-R55E-0011-R5A-SM-2TC5N 38.3
GTEX-N7MS-0011-R5a-SM-2HMK8 37.8
GTEX-RVPV-0011-R5A-SM-2TF69 37.7
GTEX-X4XX-0011-R5A-SM-46MWN 37.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 37.6
GTEX-145MH-0011-R5a-SM-5P9JT 37.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 37.4
GTEX-131YS-0011-R5b-SM-5K7YB 36.0
GTEX-X585-0011-R5A-SM-46MVI 36.0
GTEX-12WSF-0011-R5a-SM-5HL8K 35.7
GTEX-QVJO-0011-R5A-SM-2S1QM 34.5
GTEX-145LS-0011-R5a-SM-5SI65 34.1
GTEX-14BIM-0011-R5b-SM-5S2RM 33.5
GTEX-1313W-0011-R5b-SM-5L3EP 33.4
GTEX-T5JC-0011-R5A-SM-32PLK 33.3
GTEX-13FXS-0011-R5b-SM-5LZYE 33.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 33.1
GTEX-13S7M-0011-R5b-SM-5P9HS 33.0
GTEX-13X6J-0011-R5b-SM-5PNWT 32.6
GTEX-13SLX-0011-R5a-SM-5O9BV 32.5
GTEX-13O3O-0011-R5b-SM-5KM44 32.0
GTEX-RU72-0011-R5A-SM-2TF6U 32.0
GTEX-11NV4-0011-R5a-SM-5NQ88 31.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 31.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 31.3
GTEX-14ABY-0011-R5b-SM-5SI7B 31.2
GTEX-13OVH-0011-R5b-SM-5KM4L 31.1
GTEX-11GSP-0011-R5a-SM-57WBE 30.8
GTEX-13VXU-0011-R5a-SM-5O9D7 30.8
GTEX-13OVL-0011-R5b-SM-5L3FU 30.5
GTEX-13G51-0011-R5a-SM-5L3EB 30.4
GTEX-13NYS-0011-R5a-SM-5MR4D 30.4
GTEX-S7SE-0011-R5A-SM-2XCDA 30.0
GTEX-12WSC-0011-R5b-SM-5CVNS 29.9
GTEX-13FLW-0011-R5a-SM-5LZX6 29.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 29.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 29.6
GTEX-13X6I-0011-R5a-SM-5PNWW 29.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 29.5
GTEX-WVLH-0011-R5A-SM-3MJFW 29.4
GTEX-Z93S-0011-R5b-SM-4RGNI 29.1
GTEX-139TT-0011-R5b-SM-5K7W8 29.0
GTEX-UTHO-0011-R5A-SM-3GIJD 28.5
GTEX-11OF3-0011-R5a-SM-57WB4 28.2
GTEX-13NYB-0011-R5a-SM-5MR45 27.6
GTEX-PVOW-0011-R5A-SM-32PL7 27.6
GTEX-13X6K-0011-R5b-SM-5PNUE 27.2
GTEX-1399T-0011-R5b-SM-5IJDK 27.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 26.6
GTEX-N7MT-0011-R5a-SM-2I3G6 26.6
GTEX-13OW7-0011-R5b-SM-5O9DM 26.5
GTEX-13OW5-0011-R5b-SM-5L3FR 26.1
GTEX-11H98-0011-R5b-SM-57WCF 26.0
GTEX-ZUA1-0011-R5b-SM-51MTG 25.9
GTEX-T6MN-0011-R5A-SM-32QPD 25.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 25.5
GTEX-NL4W-0011-R5a-SM-2I3GD 25.4
GTEX-13OW6-0011-R5a-SM-5O9BK 25.1
GTEX-14BIN-0011-R5b-SM-5SI78 25.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 24.8
GTEX-XOTO-0011-R5A-SM-4B657 24.8
GTEX-ZXG5-0011-R5b-SM-57WBN 24.8
GTEX-T2IS-0011-R5A-SM-32QP4 24.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 24.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 24.3
GTEX-12WSD-0011-R5b-SM-5CVNG 23.8
GTEX-12ZZX-0011-R5a-SM-5HL89 23.2
GTEX-XMD1-0011-R5A-SM-4AT47 23.0
GTEX-13FLV-0011-R5a-SM-5LZWT 22.8
GTEX-ZE7O-0011-R5a-SM-57WBO 22.8
GTEX-YFC4-0011-R5a-SM-4RGLR 22.7
GTEX-12WSB-0011-R5b-SM-5GU67 22.4
GTEX-13CZV-0011-R5a-SM-5K7XA 22.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 22.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 22.1
GTEX-OHPN-0011-R5A-SM-2I5FF 22.1
GTEX-TSE9-0011-R5A-SM-3DB7J 22.0
GTEX-13JUV-0011-R5a-SM-5LZY5 21.9
GTEX-132Q8-0011-R5a-SM-5IJDM 21.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 21.3
GTEX-NL3H-0011-R5a-SM-2I3GB 20.8
GTEX-11WQC-0011-R5a-SM-5BC74 20.4
GTEX-12WSA-0011-R5b-SM-5GU5I 20.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 20.4
GTEX-12WSH-0011-R5b-SM-5P9F3 20.2
GTEX-RVPU-0011-R5A-SM-2XCAD 19.7
GTEX-13112-0011-R5b-SM-5DUV8 19.4
GTEX-P44H-0011-R5A-SM-2XCEX 19.4
GTEX-13CIG-0011-R5b-SM-5L3F2 18.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 18.8
GTEX-OXRN-0011-R5A-SM-2I5EF 18.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 18.8
GTEX-144GL-0011-R5b-SM-5PNUJ 18.7
GTEX-13JVG-0011-R5a-SM-5MR4O 18.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 17.9
GTEX-13FHP-0011-R5b-SM-5LZY2 17.1
GTEX-YJ89-0011-R5a-SM-4V6GM 17.1
GTEX-QMR6-0011-R5A-SM-32PKT 16.9
GTEX-144GO-0011-R5a-SM-5PNUR 16.8
GTEX-ZV68-0011-R5a-SM-4YCDW 16.6
GTEX-ZVT3-0011-R5a-SM-51MSI 15.2
GTEX-1445S-0011-R5a-SM-5PNUS 15.1
GTEX-X261-0011-R5A-SM-3NMB4 15.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 13.4
GTEX-NPJ7-0011-R5a-SM-33HBK 13.1
GTEX-139TS-0011-R5b-SM-5J2MZ 12.7
GTEX-13CF2-0011-R5a-SM-5LZWS 11.9
GTEX-11UD1-0011-R5b-SM-5P9FP 11.5
GTEX-139T8-0011-R5b-SM-5J1MO 11.4
GTEX-S7PM-0011-R5A-SM-3NM8G 10.3
GTEX-1477Z-0011-R5b-SM-5PNUO 9.9
GTEX-145MG-0011-R5b-SM-5S2VU 8.6
GTEX-13NZA-0011-R5b-SM-5KM4K 6.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

27.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 27.2
FF:10379-105H1 89 years, female 38.2
FF:10164-103B2 76 years, female 16.2

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