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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:410.3TPM
GTEx:31.4RPKM
FANTOM5:650.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA052583

 

Antibody HPA056072

 

Antibody CAB000013

 

Glandular cells

High   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

410.3

overview Male, age 65
Sample 1
TPM: 562.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 317.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 359.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 402.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

31.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 31.4
Samples: 88

Max RPKM: 107.5
Min RPKM: 0.1
Std RPKM: 27.3
Median RPKM: 24.8
GTEX-YEC4-1726-SM-4W21E 107.5
GTEX-ZPCL-1726-SM-57WEO 90.2
GTEX-Y9LG-1626-SM-5IFHM 89.2
GTEX-ZTSS-0926-SM-59865 83.8
GTEX-13PL7-2626-SM-5IFH4 79.7
GTEX-111YS-1426-SM-5GID8 78.0
GTEX-11P7K-1626-SM-5GU63 74.9
GTEX-13D11-0726-SM-5LZZB 73.8
GTEX-1122O-1326-SM-5H11F 72.5
GTEX-YB5E-1526-SM-5IFIE 71.3
GTEX-14DAR-1426-SM-5RQIR 71.3
GTEX-X5EB-1626-SM-4E3IV 71.1
GTEX-1399S-2026-SM-5KM4B 68.3
GTEX-ZLV1-1126-SM-4WWBW 65.4
GTEX-ZXES-1526-SM-5NQ95 64.3
GTEX-ZVZP-1826-SM-5GZXB 63.1
GTEX-145LT-1026-SM-5LU9O 61.0
GTEX-11EQ9-1326-SM-5985X 60.7
GTEX-ZZ64-0526-SM-5GZXM 59.6
GTEX-13113-1226-SM-5EGHT 57.4
GTEX-11I78-1126-SM-5A5K5 54.8
GTEX-11DXX-1626-SM-5H11H 53.3
GTEX-YF7O-1826-SM-5IFIU 52.7
GTEX-ZTX8-0526-SM-59HLD 51.1
GTEX-14E6E-1626-SM-5RQI7 49.8
GTEX-XUZC-1426-SM-4BRV3 48.4
GTEX-131XF-1326-SM-5GCMQ 47.0
GTEX-XBED-1426-SM-4AT4G 46.5
GTEX-ZYFG-2026-SM-5E43Y 45.1
GTEX-ZLFU-1526-SM-4WWBT 38.6
GTEX-XXEK-1026-SM-4BRUW 37.1
GTEX-ZTPG-2626-SM-57WFX 33.0
GTEX-XGQ4-1326-SM-4GIDU 32.4
GTEX-Y114-1426-SM-4TT6W 32.4
GTEX-12BJ1-1926-SM-5HL9Z 29.1
GTEX-ZYWO-1526-SM-5SIAL 28.2
GTEX-VJYA-0926-SM-4KL1N 27.8
GTEX-13O61-1326-SM-5KM31 27.6
GTEX-133LE-1426-SM-5IFH1 27.1
GTEX-ZVP2-1726-SM-5GU5P 27.1
GTEX-11DXZ-1326-SM-5H11X 26.6
GTEX-ZA64-1226-SM-5HL7B 26.3
GTEX-13FH7-1226-SM-5IJFK 25.6
GTEX-ZEX8-1826-SM-57WBH 25.5
GTEX-11P82-0826-SM-5P9GU 24.1
GTEX-11XUK-1426-SM-5EQMG 23.7
GTEX-1399R-2026-SM-5K7WN 22.7
GTEX-13FTW-2026-SM-5IJE2 22.3
GTEX-WFJO-0926-SM-4LVM2 20.6
GTEX-139T6-1026-SM-5IJGC 20.4
GTEX-WFG7-1726-SM-4LVME 20.2
GTEX-13CF3-1226-SM-5LZXN 18.7
GTEX-139YR-2226-SM-5IFFW 18.5
GTEX-WQUQ-2426-SM-4MVNW 17.3
GTEX-11NSD-1726-SM-5N9C3 17.2
GTEX-XAJ8-0526-SM-47JYK 15.9
GTEX-WH7G-1626-SM-4LVMY 15.7
GTEX-13O21-1026-SM-5IJDU 14.7
GTEX-ZVT2-2126-SM-5NQ93 13.4
GTEX-ZPIC-2326-SM-57WDW 11.6
GTEX-Z9EW-0926-SM-5CVMM 10.6
GTEX-13RTK-0826-SM-5Q5C6 10.4
GTEX-1399U-2126-SM-5IFEZ 10.0
GTEX-11VI4-1626-SM-5EQKO 9.3
GTEX-ZQUD-0926-SM-57WE3 7.3
GTEX-Y3IK-1726-SM-4YCCR 7.2
GTEX-WRHK-1026-SM-4MVOD 6.5
GTEX-145ME-0926-SM-5O9AR 6.2
GTEX-12WSK-1526-SM-5CVNO 5.9
GTEX-111CU-1326-SM-5NQ8L 5.2
GTEX-ZP4G-1626-SM-57WGD 4.3
GTEX-13OVI-1926-SM-5IJCG 4.1
GTEX-ZF2S-1726-SM-57WFT 3.5
GTEX-WFG8-1626-SM-4LVMB 2.8
GTEX-X15G-1426-SM-4PQZK 2.5
GTEX-13QBU-1926-SM-5IJEW 2.4
GTEX-Y5LM-1626-SM-4VDTB 1.5
GTEX-117YX-0326-SM-5GICL 1.3
GTEX-ZQG8-2526-SM-57WEQ 1.2
GTEX-XMK1-1826-SM-4B66F 1.0
GTEX-VUSG-1726-SM-4KKZL 0.9
GTEX-131XG-1726-SM-5LZUR 0.7
GTEX-WEY5-1526-SM-4LMJF 0.5
GTEX-ZC5H-2326-SM-4WAYT 0.4
GTEX-148VJ-2226-SM-5NQ9M 0.3
GTEX-13111-1426-SM-5DUW3 0.1
GTEX-1192X-2526-SM-59868 0.1
GTEX-UPK5-2026-SM-4JBIM 0.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

650.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 650.0
FF:10024-101D6 15,40,85 years, mixed 650.0

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The Human Protein Atlas project is funded
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