We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
FLNA
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:50.5TPM
GTEx:180.3RPKM
FANTOM5:400.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA001115

 

Antibody HPA002925

 

Antibody CAB000356

 

Adipocytes

Not detected   Not detected   Not detected  

Glandular cells

Not detected   Not detected   Not detected  

Myoepithelial cells

High   Medium   High  
     
     
     

BREAST - HPA RNA-seq

Average TPM

50.5

overview Female, age 52
Sample 1
TPM: 67.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 70.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 37.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 27.5
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

180.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 180.3
Samples: 214

Max RPKM: 531.7
Min RPKM: 57.6
Std RPKM: 74.6
Median RPKM: 161.7
GTEX-QVJO-1826-SM-447C9 531.7
GTEX-12WSK-2226-SM-5GCO5 525.1
GTEX-YJ8O-2226-SM-5IFHW 518.6
GTEX-Y111-2026-SM-4SOJA 388.8
GTEX-144GL-2026-SM-5LU3O 371.3
GTEX-145MN-1926-SM-5SIAI 337.2
GTEX-WI4N-1426-SM-3LK7H 334.6
GTEX-TML8-1226-SM-32QON 333.8
GTEX-11P7K-0726-SM-5EGKX 332.9
GTEX-XQ8I-2426-SM-4WAXY 320.3
GTEX-11WQK-2426-SM-5GU5C 309.5
GTEX-12WSM-1726-SM-5BC6J 306.4
GTEX-X15G-1626-SM-3NMB3 302.9
GTEX-Y3I4-1526-SM-4TT7K 302.0
GTEX-11EQ9-1826-SM-5Q5AJ 293.2
GTEX-13W3W-1226-SM-5LU4H 289.6
GTEX-ZF3C-2326-SM-5S2MZ 284.8
GTEX-R3RS-0626-SM-48FE1 283.2
GTEX-ZEX8-2226-SM-57WC6 282.2
GTEX-W5X1-2326-SM-3GIL6 281.3
GTEX-13OW5-2226-SM-5L3HC 280.7
GTEX-S32W-2026-SM-4AD6E 277.6
GTEX-X4EP-2926-SM-3P5YQ 271.2
GTEX-14E6E-1326-SM-5S2NR 270.2
GTEX-WOFL-0826-SM-3MJG1 268.1
GTEX-11WQC-1726-SM-5GU4W 266.0
GTEX-13W46-0826-SM-5LU3H 262.7
GTEX-13PL6-2926-SM-5L3I2 261.5
GTEX-RU72-0626-SM-46MUI 261.2
GTEX-1117F-2826-SM-5GZXL 259.6
GTEX-13OW8-0226-SM-5K7UP 252.7
GTEX-13CF2-2026-SM-5K7VI 250.4
GTEX-147F4-2826-SM-5NQBN 248.9
GTEX-11EI6-0626-SM-5985T 242.8
GTEX-XV7Q-2326-SM-4BRVZ 241.4
GTEX-XOT4-0726-SM-4GIAW 240.7
GTEX-11GS4-2126-SM-5A5KR 240.3
GTEX-ZLV1-1426-SM-4WWES 236.8
GTEX-1314G-1226-SM-5BC6D 235.9
GTEX-RWS6-1926-SM-47JXY 233.4
GTEX-12WSB-0626-SM-59HJO 230.3
GTEX-12ZZX-1126-SM-5EGKB 229.2
GTEX-13113-1726-SM-5GCOO 226.1
GTEX-ZU9S-1926-SM-5NQBP 225.9
GTEX-WYBS-0926-SM-3NM94 225.7
GTEX-WXYG-2226-SM-4E3IM 225.2
GTEX-WYJK-1326-SM-3NB2T 222.2
GTEX-T2IS-1526-SM-32QPR 221.9
GTEX-ZF29-1926-SM-5S2P1 220.0
GTEX-ZVT4-1026-SM-57WC4 217.7
GTEX-11DXW-0626-SM-5N9ER 216.3
GTEX-U3ZN-1926-SM-4DXSG 215.7
GTEX-XMD2-0926-SM-4WWEF 214.6
GTEX-13O3Q-2226-SM-5KM4O 214.0
GTEX-13NZ8-0126-SM-5IJCT 213.9
GTEX-SE5C-2126-SM-4BRUJ 209.5
GTEX-QDT8-0626-SM-48TYW 209.0
GTEX-11PRG-0826-SM-5EQ6A 208.7
GTEX-Y3IK-2326-SM-4WWDT 208.3
GTEX-146FH-0826-SM-5SI8T 208.0
GTEX-11ZUS-0826-SM-5FQUY 207.4
GTEX-UJHI-1426-SM-3DB9C 206.5
GTEX-R53T-1526-SM-48FEK 203.5
GTEX-YFC4-1426-SM-5IFJG 202.9
GTEX-1313W-0826-SM-5EQ4T 202.6
GTEX-11O72-2126-SM-5N9FO 202.1
GTEX-Y5V5-2126-SM-4WWFO 201.6
GTEX-ZYW4-0826-SM-5GIDG 201.6
GTEX-ZY6K-1626-SM-5GZWV 200.5
GTEX-1269C-2426-SM-5FQSN 197.8
GTEX-12WSN-1326-SM-5GCNT 197.7
GTEX-131YS-0626-SM-5EGKL 196.7
GTEX-1122O-1226-SM-5H113 193.5
GTEX-ZZPU-0626-SM-5E43T 192.6
GTEX-XBED-1626-SM-47JYN 188.5
GTEX-Y8E4-1626-SM-5S2MW 186.5
GTEX-ZDYS-1126-SM-5K7UB 185.0
GTEX-ZUA1-1526-SM-59HLS 183.7
GTEX-11OF3-1926-SM-59889 183.5
GTEX-11TT1-2126-SM-5GU5Y 182.5
GTEX-Q2AG-0326-SM-48U1O 180.1
GTEX-U3ZH-1426-SM-4DXSR 180.1
GTEX-S341-1526-SM-4AD6K 179.3
GTEX-XUW1-2326-SM-4BOO5 176.2
GTEX-ZC5H-2626-SM-5J2MG 175.8
GTEX-YEC3-1026-SM-5IFI5 175.2
GTEX-XUJ4-1926-SM-4BOOV 175.0
GTEX-ZAJG-0626-SM-5HL8X 173.7
GTEX-132AR-0826-SM-5EGK6 173.2
GTEX-ZWKS-2826-SM-5NQ74 173.2
GTEX-S4P3-1326-SM-4AD6V 172.2
GTEX-13O3O-0826-SM-5K7WE 171.4
GTEX-13NZ9-1026-SM-5MR5K 170.6
GTEX-T5JW-2026-SM-4DM63 169.6
GTEX-11NV4-2026-SM-5N9DG 168.9
GTEX-11ONC-2126-SM-5HL6E 168.3
GTEX-11P81-1926-SM-5BC53 167.4
GTEX-R55D-0826-SM-48FEA 167.3
GTEX-Y8LW-1626-SM-5IFHX 167.0
GTEX-ZYWO-2326-SM-5GZY4 166.6
GTEX-TKQ1-0226-SM-33HB5 166.5
GTEX-13FTY-2226-SM-5J1ND 164.2
GTEX-ZV7C-1826-SM-5NQ83 164.1
GTEX-WRHU-0326-SM-3MJFY 163.6
GTEX-133LE-1726-SM-5K7VQ 163.5
GTEX-132NY-0826-SM-5K7Y7 162.5
GTEX-RUSQ-2026-SM-4GIAK 161.8
GTEX-13N11-1726-SM-5J1OJ 161.6
GTEX-UPK5-2326-SM-3P5Z8 161.0
GTEX-ZV6S-1826-SM-5NQ8D 160.9
GTEX-REY6-2426-SM-48FF5 160.7
GTEX-13D11-1026-SM-5IJFB 160.3
GTEX-TKQ2-1826-SM-33HB2 159.9
GTEX-11EMC-2026-SM-5A5JV 159.2
GTEX-ZDTT-2126-SM-5S2OJ 158.8
GTEX-ZVZQ-0826-SM-51MRF 158.3
GTEX-XYKS-1326-SM-4BRUN 157.8
GTEX-YB5E-1726-SM-5IFJ3 157.4
GTEX-X261-0626-SM-3NMD9 156.6
GTEX-T5JC-2126-SM-32PMO 155.7
GTEX-ZPIC-1126-SM-5BC7F 155.2
GTEX-13QIC-2326-SM-5LU5N 153.8
GTEX-11LCK-2426-SM-5HL5F 153.3
GTEX-ZVT2-1826-SM-5NQ8W 152.9
GTEX-ZYFC-0826-SM-5E44K 152.9
GTEX-11NSD-0926-SM-5N9DR 152.1
GTEX-X4XY-0926-SM-4E3JD 151.9
GTEX-T6MN-0726-SM-32PML 150.8
GTEX-139TU-0626-SM-5KM3X 150.1
GTEX-13N1W-0626-SM-5MR4U 149.9
GTEX-1211K-1926-SM-5EQLB 149.1
GTEX-VJWN-0726-SM-3GIJ8 148.8
GTEX-XQ3S-1326-SM-4BOPQ 148.7
GTEX-Y5LM-1726-SM-4VDSX 148.4
GTEX-1399U-1826-SM-5PNZ1 145.3
GTEX-S7SE-0826-SM-4AT4D 145.2
GTEX-ZTX8-1226-SM-4YCE9 144.7
GTEX-11DXY-2326-SM-5GICW 144.2
GTEX-VUSG-2226-SM-4KKZO 143.7
GTEX-WY7C-2726-SM-3NB3P 143.7
GTEX-Y5V6-2126-SM-4WWFX 143.0
GTEX-11DZ1-0326-SM-5N9BN 142.7
GTEX-U8XE-0826-SM-4E3J1 142.0
GTEX-WFON-1826-SM-3GILG 141.5
GTEX-13S86-1226-SM-5S2OA 140.0
GTEX-S4Q7-1126-SM-4AD6R 140.0
GTEX-ZQUD-1926-SM-51MSA 139.9
GTEX-YFCO-1826-SM-4W1YH 139.5
GTEX-ZF2S-2026-SM-5E461 139.4
GTEX-ZXES-0826-SM-5E43C 139.4
GTEX-117YX-1426-SM-5H12H 138.4
GTEX-13FHO-0826-SM-5L3E8 137.1
GTEX-12KS4-0126-SM-5Q5A5 136.9
GTEX-145MO-0826-SM-5NQBL 136.9
GTEX-Y114-2026-SM-4TT7L 135.7
GTEX-117XS-1926-SM-5GICO 134.9
GTEX-11DXZ-1926-SM-5GZZL 134.9
GTEX-QEG5-0726-SM-4R1JQ 134.4
GTEX-13FTW-1426-SM-5LZWZ 134.1
GTEX-R55F-1726-SM-2TF4R 133.7
GTEX-S33H-0326-SM-4AD6N 132.6
GTEX-XMD1-0826-SM-4AT52 132.6
GTEX-ZA64-1526-SM-5CVMD 132.6
GTEX-11I78-2226-SM-5PNYA 131.0
GTEX-T2YK-2226-SM-32QPT 130.5
GTEX-ZVE2-1226-SM-5NQ8R 129.3
GTEX-139T8-0826-SM-5L3DE 128.7
GTEX-11GSO-1926-SM-5A5K3 127.0
GTEX-ZZ64-1226-SM-5E43R 125.7
GTEX-139T6-1626-SM-5PNYZ 125.6
GTEX-WYVS-1726-SM-3NMAY 125.5
GTEX-T6MO-0326-SM-32QOK 123.9
GTEX-144GM-0926-SM-5O994 122.3
GTEX-SIU7-1626-SM-4BRUK 122.0
GTEX-XUZC-1626-SM-4BRVP 121.0
GTEX-ZQG8-0726-SM-5P9H9 119.1
GTEX-ZYT6-0126-SM-5E45J 119.0
GTEX-13FTX-1126-SM-5N9EN 116.6
GTEX-11EM3-1326-SM-5N9C6 116.2
GTEX-Y9LG-1426-SM-5IFJZ 115.9
GTEX-11ZTT-2326-SM-5EQLG 115.4
GTEX-ZDXO-0126-SM-5S2ND 115.1
GTEX-1192X-2326-SM-5987X 113.9
GTEX-13O61-1826-SM-5KM4I 112.8
GTEX-111YS-1926-SM-5GICC 112.7
GTEX-12BJ1-1826-SM-5HL9N 112.2
GTEX-ZVTK-0326-SM-51MRR 111.8
GTEX-TMMY-0726-SM-33HBE 111.6
GTEX-QMRM-1626-SM-4R1KV 111.2
GTEX-14753-2426-SM-5LU8U 109.0
GTEX-13PVQ-1026-SM-5KM3M 107.6
GTEX-ZAB4-2526-SM-5HL8M 107.4
GTEX-13NZB-2126-SM-5MR4Y 107.1
GTEX-13O3P-0826-SM-5L3DH 105.6
GTEX-145LT-0726-SM-5S2VM 105.1
GTEX-XGQ4-0926-SM-4AT4U 104.4
GTEX-14AS3-1626-SM-5S2OY 104.3
GTEX-145ME-1526-SM-5Q5F2 102.0
GTEX-11TUW-1826-SM-5BC5D 101.9
GTEX-131XW-0726-SM-5EGK3 100.4
GTEX-11P82-1326-SM-5HL62 98.2
GTEX-ZT9W-2026-SM-51MRA 96.2
GTEX-S4UY-0726-SM-4AD6X 95.4
GTEX-ZLFU-2126-SM-4WWEV 94.9
GTEX-13CF3-2126-SM-5IFJP 93.3
GTEX-QEL4-2126-SM-447AE 92.8
GTEX-ZTTD-1026-SM-51MRD 91.7
GTEX-XMK1-1126-SM-4IHJ8 88.9
GTEX-U412-1826-SM-4DXTJ 86.9
GTEX-PSDG-1626-SM-48TCQ 85.7
GTEX-YB5K-1626-SM-5IFIN 78.7
GTEX-UTHO-1026-SM-3GAF7 67.2
GTEX-14ABY-2126-SM-5QGQZ 64.7
GTEX-132Q8-1426-SM-5EGK7 57.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

400.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 400.9
FF:10080-102A8 77 years, female 400.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.