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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:18.3RPKM
FANTOM5:57.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA001115

 

Antibody HPA002925

 

Antibody CAB000356

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Low   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

18.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 18.3
Samples: 117

Max RPKM: 45.2
Min RPKM: 5.9
Std RPKM: 7.4
Median RPKM: 16.3
GTEX-132Q8-0011-R5a-SM-5IJDM 45.2
GTEX-13NYS-0011-R5a-SM-5MR4D 44.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 43.3
GTEX-XMD1-0011-R5A-SM-4AT47 39.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 39.2
GTEX-13JUV-0011-R5a-SM-5LZY5 38.0
GTEX-RVPV-0011-R5A-SM-2TF69 32.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 32.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 31.2
GTEX-13JVG-0011-R5a-SM-5MR4O 28.7
GTEX-N7MT-0011-R5a-SM-2I3G6 27.5
GTEX-12WSF-0011-R5a-SM-5HL8K 27.1
GTEX-X261-0011-R5A-SM-3NMB4 26.4
GTEX-ZE7O-0011-R5a-SM-57WBO 25.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 25.1
GTEX-QVJO-0011-R5A-SM-2S1QM 24.9
GTEX-WL46-0011-R5A-SM-3LK6V 24.5
GTEX-X585-0011-R5A-SM-46MVI 24.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 23.5
GTEX-11GSP-0011-R5a-SM-57WBE 22.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 22.8
GTEX-X4XX-0011-R5A-SM-46MWN 22.8
GTEX-13X6K-0011-R5b-SM-5PNUE 22.2
GTEX-NL4W-0011-R5a-SM-2I3GD 22.0
GTEX-1399T-0011-R5b-SM-5IJDK 21.9
GTEX-13OW6-0011-R5a-SM-5O9BK 21.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 21.4
GTEX-144GO-0011-R5a-SM-5PNUR 21.1
GTEX-N7MS-0011-R5a-SM-2HMK8 21.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 21.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 20.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 20.6
GTEX-13X6I-0011-R5a-SM-5PNWW 20.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 20.2
GTEX-139TS-0011-R5b-SM-5J2MZ 19.9
GTEX-14BIM-0011-R5b-SM-5S2RM 19.5
GTEX-11UD1-0011-R5b-SM-5P9FP 19.3
GTEX-13OW5-0011-R5b-SM-5L3FR 19.0
GTEX-139T8-0011-R5b-SM-5J1MO 18.8
GTEX-OHPN-0011-R5A-SM-2I5FF 18.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 18.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 18.5
GTEX-NL3H-0011-R5a-SM-2I3GB 18.3
GTEX-UTHO-0011-R5A-SM-3GIJD 18.3
GTEX-YFC4-0011-R5a-SM-4RGLR 18.3
GTEX-S7SE-0011-R5A-SM-2XCDA 18.2
GTEX-13G51-0011-R5a-SM-5L3EB 18.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 17.9
GTEX-WZTO-0011-R5B-SM-3NMC5 17.8
GTEX-145MH-0011-R5a-SM-5P9JT 17.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 17.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 17.3
GTEX-13112-0011-R5b-SM-5DUV8 17.2
GTEX-12WSD-0011-R5b-SM-5CVNG 17.1
GTEX-RU72-0011-R5A-SM-2TF6U 16.9
GTEX-131YS-0011-R5b-SM-5K7YB 16.7
GTEX-13CIG-0011-R5b-SM-5L3F2 16.5
GTEX-14ABY-0011-R5b-SM-5SI7B 16.5
GTEX-WVLH-0011-R5A-SM-3MJFW 16.3
GTEX-13SLX-0011-R5a-SM-5O9BV 16.1
GTEX-T5JC-0011-R5A-SM-32PLK 16.1
GTEX-WWYW-0011-R5A-SM-3NB3E 16.1
GTEX-RVPU-0011-R5A-SM-2XCAD 16.0
GTEX-S7PM-0011-R5A-SM-3NM8G 16.0
GTEX-T6MN-0011-R5A-SM-32QPD 15.8
GTEX-13O3O-0011-R5b-SM-5KM44 15.7
GTEX-13VXU-0011-R5a-SM-5O9D7 15.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 15.7
GTEX-13NYB-0011-R5a-SM-5MR45 15.6
GTEX-13FLW-0011-R5a-SM-5LZX6 15.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 15.4
GTEX-R55E-0011-R5A-SM-2TC5N 15.4
GTEX-145LS-0011-R5a-SM-5SI65 15.3
GTEX-1477Z-0011-R5b-SM-5PNUO 15.3
GTEX-11H98-0011-R5b-SM-57WCF 15.2
GTEX-12WSB-0011-R5b-SM-5GU67 15.0
GTEX-13FLV-0011-R5a-SM-5LZWT 15.0
GTEX-13OW7-0011-R5b-SM-5O9DM 15.0
GTEX-13S7M-0011-R5b-SM-5P9HS 14.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 14.8
GTEX-13FXS-0011-R5b-SM-5LZYE 14.5
GTEX-12WSC-0011-R5b-SM-5CVNS 14.4
GTEX-12ZZX-0011-R5a-SM-5HL89 14.4
GTEX-13CF2-0011-R5a-SM-5LZWS 14.4
GTEX-1445S-0011-R5a-SM-5PNUS 14.2
GTEX-13OVL-0011-R5b-SM-5L3FU 13.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 13.7
GTEX-Z93S-0011-R5b-SM-4RGNI 13.7
GTEX-P44H-0011-R5A-SM-2XCEX 13.5
GTEX-13OVH-0011-R5b-SM-5KM4L 13.4
GTEX-13X6J-0011-R5b-SM-5PNWT 13.4
GTEX-ZXG5-0011-R5b-SM-57WBN 13.4
GTEX-1313W-0011-R5b-SM-5L3EP 13.3
GTEX-144GL-0011-R5b-SM-5PNUJ 13.3
GTEX-14BIN-0011-R5b-SM-5SI78 13.3
GTEX-OXRN-0011-R5A-SM-2I5EF 13.3
GTEX-11OF3-0011-R5a-SM-57WB4 13.0
GTEX-ZVT3-0011-R5a-SM-51MSI 13.0
GTEX-13CZV-0011-R5a-SM-5K7XA 12.9
GTEX-13FHP-0011-R5b-SM-5LZY2 12.9
GTEX-13NZA-0011-R5b-SM-5KM4K 12.5
GTEX-11NV4-0011-R5a-SM-5NQ88 12.3
GTEX-YJ89-0011-R5a-SM-4V6GM 12.0
GTEX-PVOW-0011-R5A-SM-32PL7 11.7
GTEX-ZV68-0011-R5a-SM-4YCDW 11.7
GTEX-ZUA1-0011-R5b-SM-51MTG 11.2
GTEX-11WQC-0011-R5a-SM-5BC74 11.0
GTEX-145MG-0011-R5b-SM-5S2VU 11.0
GTEX-TSE9-0011-R5A-SM-3DB7J 11.0
GTEX-XOTO-0011-R5A-SM-4B657 10.8
GTEX-NPJ7-0011-R5a-SM-33HBK 10.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 9.2
GTEX-QMR6-0011-R5A-SM-32PKT 8.9
GTEX-12WSA-0011-R5b-SM-5GU5I 7.0
GTEX-139TT-0011-R5b-SM-5K7W8 6.5
GTEX-12WSH-0011-R5b-SM-5P9F3 6.1
GTEX-T2IS-0011-R5A-SM-32QP4 5.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

57.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 57.4
FF:10164-103B2 76 years, female 58.3
FF:10379-105H1 89 years, female 56.5

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