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TISSUE ATLAS PRIMARY DATA KIDNEY
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.1TPM
GTEx:94.0RPKM
FANTOM5:304.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:High
Cells in tubules:Low
 

Antibody staining

Antibody HPA001115

 

Antibody HPA002925

 

Antibody CAB000356

 

Cells in glomeruli

High   High   Medium  

Cells in tubules

Low   Low   Low  
     
     
     

KIDNEY - HPA RNA-seq

Average TPM

32.1

overview Female, age 58
Sample 1
TPM: 50.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 44.7
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 72.8
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 57.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 4.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 11.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 11.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 27.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 7.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

94.0

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 94.0
Samples: 32

Max RPKM: 242.7
Min RPKM: 26.6
Std RPKM: 62.3
Median RPKM: 68.4
GTEX-ZLFU-0926-SM-5P9F8 242.7
GTEX-ZYFG-1626-SM-5GZYY 206.1
GTEX-ZVZP-0926-SM-5GIDB 202.0
GTEX-147F4-2626-SM-5Q5CS 195.6
GTEX-11TTK-1926-SM-5PNW8 172.6
GTEX-1399S-0526-SM-5IJG8 164.3
GTEX-RN64-1626-SM-48FD7 148.2
GTEX-QLQW-1626-SM-4R1K1 145.3
GTEX-UPIC-1126-SM-4IHLO 143.5
GTEX-XPVG-0526-SM-4B65N 136.8
GTEX-12696-0926-SM-5FQTV 115.8
GTEX-145MN-0326-SM-5QGQI 114.7
GTEX-13112-2126-SM-5GCO4 98.7
GTEX-13OVI-1126-SM-5KLZF 96.4
GTEX-11GS4-2326-SM-5A5KS 75.5
GTEX-13OVL-1826-SM-5KLZR 72.1
GTEX-13RTJ-2226-SM-5S2Q1 64.7
GTEX-1497J-0826-SM-5NQAJ 59.8
GTEX-QDVN-1626-SM-48TZC 59.2
GTEX-ZYT6-2226-SM-5GIC9 56.7
GTEX-P4QS-1126-SM-3NMD5 46.7
GTEX-ZYFD-1526-SM-5NQ7T 46.6
GTEX-13O1R-2526-SM-5N9FW 44.7
GTEX-13NYB-1726-SM-5N9G2 42.0
GTEX-12WSG-0826-SM-5EQ5A 40.1
GTEX-ZC5H-1726-SM-5HL7X 37.4
GTEX-Y5V6-2026-SM-5IFHO 36.8
GTEX-T5JC-1526-SM-4DM68 31.8
GTEX-13OW6-1826-SM-5N9F9 29.2
GTEX-NPJ8-2226-SM-3TW8D 28.0
GTEX-N7MS-1626-SM-3LK5F 27.7
GTEX-11OF3-1326-SM-5N9FJ 26.6
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

304.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 304.3
FF:10017-101C8 60,62,63 years, female 304.3

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