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TISSUE ATLAS PRIMARY DATA LIVER
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.3TPM
GTEx:17.4RPKM
FANTOM5:76.8Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA001115

 

Antibody HPA002925

 

Antibody CAB000356

 

Bile duct cells

Not detected   Medium   Medium  

Hepatocytes

Not detected   Not detected   Not detected  
     
     
     

LIVER - HPA RNA-seq

Average TPM

8.3

N/A Female, age 60
Sample 1
TPM: 14.5
overview Male, age 54
Sample 2
TPM: 20.8
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 19.2
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 1.3
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 2.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 3.1
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 5.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 5.0
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 4.8
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 6.2
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

17.4

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 17.4
Samples: 119

Max RPKM: 81.1
Min RPKM: 5
Std RPKM: 14
Median RPKM: 11.9
GTEX-ZAB4-0826-SM-5LU9D 81.1
GTEX-QDVN-0826-SM-48TZ2 73.6
GTEX-147F4-1426-SM-5LUA8 70.9
GTEX-UTHO-2426-SM-4JBHD 59.5
GTEX-ZYY3-0626-SM-5NQ6W 49.9
GTEX-131XE-0326-SM-5LZVO 49.2
GTEX-1497J-0726-SM-5Q5D1 46.1
GTEX-12KS4-1326-SM-5LUB3 44.9
GTEX-YB5E-0326-SM-5IFHU 38.4
GTEX-ZTPG-1426-SM-51MT3 37.6
GTEX-WYVS-1926-SM-4PQZ2 36.5
GTEX-Q734-0326-SM-48U15 33.6
GTEX-S32W-1926-SM-4AD63 33.2
GTEX-ZVT4-0626-SM-5E45T 33.2
GTEX-11GSP-0626-SM-5986T 32.8
GTEX-12WSI-0226-SM-5GCNA 32.7
GTEX-131YS-1626-SM-5HL6C 31.6
GTEX-12WSM-0726-SM-5GCOW 30.6
GTEX-ZAB5-0426-SM-5CVMI 28.2
GTEX-12WSD-1426-SM-5GCN9 27.7
GTEX-Q2AG-1126-SM-48U1P 25.2
GTEX-11EQ9-0526-SM-5A5JZ 24.8
GTEX-XBEC-1526-SM-4AT68 24.5
GTEX-X261-1726-SM-4PQYT 24.1
GTEX-13FTW-1126-SM-5J2NV 23.9
GTEX-WFON-1726-SM-4LVMQ 22.0
GTEX-147JS-1126-SM-5RQIW 21.8
GTEX-1269C-0626-SM-5FQSS 21.4
GTEX-13FLV-0326-SM-5N9DJ 20.2
GTEX-T6MN-1226-SM-3NMA5 19.6
GTEX-QEL4-1226-SM-447A4 19.4
GTEX-ZVT3-1626-SM-5GU66 19.0
GTEX-13NZB-0626-SM-5IFH6 17.6
GTEX-145MO-2326-SM-5NQ9K 17.1
GTEX-12WSG-0626-SM-5FQTQ 16.6
GTEX-139TU-0826-SM-5IJFG 16.3
GTEX-XOTO-0826-SM-4B65O 16.3
GTEX-13N11-0926-SM-5IJG2 16.2
GTEX-RM2N-1926-SM-48FCU 16.2
GTEX-RNOR-1426-SM-48FDJ 16.2
GTEX-1399T-0826-SM-5IFES 16.1
GTEX-ZVP2-0626-SM-51MSO 15.8
GTEX-RWSA-1426-SM-47JXA 15.3
GTEX-S4Z8-0526-SM-4AD4T 15.2
GTEX-X4EO-1126-SM-4QARQ 15.0
GTEX-RTLS-1326-SM-46MUN 14.9
GTEX-13N2G-0926-SM-5IFGJ 14.7
GTEX-1212Z-0226-SM-59HLF 14.1
GTEX-11WQC-0726-SM-5EQMR 13.8
GTEX-S33H-1626-SM-4AD68 13.8
GTEX-145LU-1326-SM-5LU9N 13.6
GTEX-VUSG-0126-SM-4KL1X 13.0
GTEX-139YR-0226-SM-5IFEM 12.8
GTEX-14C38-1526-SM-5RQJ7 12.8
GTEX-13SLX-1226-SM-5S2Q6 12.5
GTEX-RU72-1426-SM-46MUF 12.5
GTEX-QV44-0326-SM-4R1KD 12.4
GTEX-13QJC-0726-SM-5RQJK 12.3
GTEX-11DXZ-0126-SM-5EGGY 12.0
GTEX-13OW6-2626-SM-5IFF2 11.9
GTEX-11ZTS-1426-SM-5EQMM 11.8
GTEX-13NYB-1026-SM-5IFH3 11.8
GTEX-146FH-1526-SM-5NQBU 11.8
GTEX-11ZVC-0726-SM-5FQT9 11.7
GTEX-13113-1326-SM-5GCOI 11.7
GTEX-13112-1426-SM-5EGH8 11.5
GTEX-YECK-1926-SM-4W21H 11.5
GTEX-Z9EW-0426-SM-5CVM9 11.4
GTEX-Y5V5-0926-SM-4VBPZ 11.3
GTEX-139TS-1426-SM-5IFJD 11.2
GTEX-YFC4-1526-SM-5IFJS 10.9
GTEX-RN64-1826-SM-48FDV 10.5
GTEX-X3Y1-2726-SM-4PQZH 10.5
GTEX-YEC4-0826-SM-5P9FV 10.5
GTEX-14DAQ-1726-SM-5S2R2 10.4
GTEX-Y5LM-0426-SM-4VBRO 10.4
GTEX-ZZPU-0426-SM-5GZYH 10.4
GTEX-P78B-1326-SM-3P611 10.3
GTEX-PX3G-0826-SM-48TZS 10.1
GTEX-13PVR-0126-SM-5S2PY 10.0
GTEX-U3ZN-0226-SM-3DB8D 10.0
GTEX-UPK5-1426-SM-4JBHH 10.0
GTEX-11NV4-1326-SM-5HL6V 9.9
GTEX-UPIC-0926-SM-4IHLV 9.7
GTEX-1399R-1226-SM-5P9GF 9.6
GTEX-11NUK-1226-SM-5P9GM 9.5
GTEX-11DXY-0526-SM-5EGGQ 9.4
GTEX-14753-1626-SM-5NQ9L 9.4
GTEX-144GM-1326-SM-5LU5E 9.2
GTEX-TKQ2-1726-SM-4DXUP 9.1
GTEX-ZF29-2026-SM-4WWB7 9.0
GTEX-11OF3-0726-SM-5BC4Z 8.7
GTEX-145MF-0826-SM-5QGQA 8.7
GTEX-OOBJ-0826-SM-3NB2K 8.7
GTEX-WQUQ-1926-SM-4OOSA 8.6
GTEX-11ZUS-2526-SM-59872 8.4
GTEX-13O3O-1826-SM-5IFGW 8.4
GTEX-SJXC-1226-SM-4DM78 8.4
GTEX-12ZZZ-1326-SM-59HKW 8.3
GTEX-QESD-2026-SM-447BI 8.1
GTEX-ZF2S-3026-SM-4WWCH 8.1
GTEX-12WSL-0226-SM-5CVMJ 8.0
GTEX-R53T-0326-SM-48FEC 7.9
GTEX-13NZ9-1326-SM-5MR3V 7.8
GTEX-13VXU-0926-SM-5IFFH 7.5
GTEX-14AS3-0126-SM-5Q5F4 7.4
GTEX-X4EP-1026-SM-4QAS5 7.3
GTEX-131XH-0626-SM-5LZWH 7.2
GTEX-X4XY-1626-SM-46MVN 7.2
GTEX-QEG4-1826-SM-4R1JN 7.1
GTEX-132NY-0926-SM-5P9G3 7.0
GTEX-WZTO-0626-SM-4PQYY 6.8
GTEX-13FTZ-0726-SM-5IFFY 6.6
GTEX-REY6-1226-SM-48FDR 6.4
GTEX-ZPU1-0826-SM-57WG2 6.2
GTEX-12696-0826-SM-5EGGE 5.9
GTEX-ZYT6-0626-SM-5E45V 5.8
GTEX-14E1K-0326-SM-5S2PE 5.5
GTEX-14A5I-1726-SM-5QGQ5 5.0
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

76.8

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 76.8
FF:10018-101C9 64,69,70 years, mixed 76.8

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