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CASP4
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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.6TPM
GTEx:15.2RPKM
FANTOM5:106.4Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA027588

 

Antibody CAB037167

 

Bile duct cells

Medium   Medium  

Hepatocytes

Not detected   High  
   
   
   

LIVER - HPA RNA-seq

Average TPM

18.6

N/A Female, age 60
Sample 1
TPM: 22.5
overview Male, age 54
Sample 2
TPM: 18.9
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 12.5
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 24.8
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 18.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 17.7
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 24.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 16.6
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 11.1
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 18.9
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 15.2
Samples: 119

Max RPKM: 66.3
Min RPKM: 2.3
Std RPKM: 12.8
Median RPKM: 11.2
GTEX-139YR-0226-SM-5IFEM 66.3
GTEX-X4XY-1626-SM-46MVN 62.7
GTEX-131XE-0326-SM-5LZVO 62.5
GTEX-13O3O-1826-SM-5IFGW 53.3
GTEX-QEL4-1226-SM-447A4 53.2
GTEX-ZTPG-1426-SM-51MT3 53.1
GTEX-QDVN-0826-SM-48TZ2 47.5
GTEX-146FH-1526-SM-5NQBU 43.7
GTEX-144GM-1326-SM-5LU5E 35.2
GTEX-VUSG-0126-SM-4KL1X 31.8
GTEX-S32W-1926-SM-4AD63 31.0
GTEX-14C38-1526-SM-5RQJ7 29.6
GTEX-X4EP-1026-SM-4QAS5 28.0
GTEX-ZYY3-0626-SM-5NQ6W 26.2
GTEX-Q734-0326-SM-48U15 25.9
GTEX-ZPU1-0826-SM-57WG2 25.4
GTEX-RM2N-1926-SM-48FCU 25.3
GTEX-13NZ9-1326-SM-5MR3V 24.2
GTEX-13N11-0926-SM-5IJG2 23.1
GTEX-X4EO-1126-SM-4QARQ 22.9
GTEX-YFC4-1526-SM-5IFJS 22.6
GTEX-RWSA-1426-SM-47JXA 22.2
GTEX-12WSG-0626-SM-5FQTQ 21.1
GTEX-UTHO-2426-SM-4JBHD 20.2
GTEX-12WSL-0226-SM-5CVMJ 19.9
GTEX-YB5E-0326-SM-5IFHU 19.6
GTEX-TKQ2-1726-SM-4DXUP 19.5
GTEX-REY6-1226-SM-48FDR 19.1
GTEX-13FTW-1126-SM-5J2NV 18.2
GTEX-QV44-0326-SM-4R1KD 18.2
GTEX-145MO-2326-SM-5NQ9K 17.6
GTEX-S33H-1626-SM-4AD68 17.1
GTEX-1497J-0726-SM-5Q5D1 16.1
GTEX-ZAB4-0826-SM-5LU9D 16.0
GTEX-Y5LM-0426-SM-4VBRO 15.8
GTEX-1269C-0626-SM-5FQSS 15.6
GTEX-ZVT4-0626-SM-5E45T 15.2
GTEX-S4Z8-0526-SM-4AD4T 15.1
GTEX-12696-0826-SM-5EGGE 14.7
GTEX-139TU-0826-SM-5IJFG 14.6
GTEX-WYVS-1926-SM-4PQZ2 14.2
GTEX-13PVR-0126-SM-5S2PY 13.9
GTEX-147F4-1426-SM-5LUA8 13.9
GTEX-WQUQ-1926-SM-4OOSA 13.9
GTEX-P78B-1326-SM-3P611 13.6
GTEX-WFON-1726-SM-4LVMQ 13.6
GTEX-13N2G-0926-SM-5IFGJ 13.4
GTEX-13113-1326-SM-5GCOI 12.7
GTEX-132NY-0926-SM-5P9G3 12.6
GTEX-12KS4-1326-SM-5LUB3 12.4
GTEX-13SLX-1226-SM-5S2Q6 12.3
GTEX-RTLS-1326-SM-46MUN 12.2
GTEX-U3ZN-0226-SM-3DB8D 12.1
GTEX-R53T-0326-SM-48FEC 12.0
GTEX-UPK5-1426-SM-4JBHH 12.0
GTEX-ZAB5-0426-SM-5CVMI 12.0
GTEX-YEC4-0826-SM-5P9FV 11.9
GTEX-ZVP2-0626-SM-51MSO 11.7
GTEX-ZZPU-0426-SM-5GZYH 11.5
GTEX-X3Y1-2726-SM-4PQZH 11.2
GTEX-Z9EW-0426-SM-5CVM9 11.2
GTEX-ZF29-2026-SM-4WWB7 11.2
GTEX-13FLV-0326-SM-5N9DJ 10.9
GTEX-XOTO-0826-SM-4B65O 10.8
GTEX-X261-1726-SM-4PQYT 10.5
GTEX-1399R-1226-SM-5P9GF 10.4
GTEX-11EQ9-0526-SM-5A5JZ 10.3
GTEX-QESD-2026-SM-447BI 10.2
GTEX-1399T-0826-SM-5IFES 10.0
GTEX-RU72-1426-SM-46MUF 10.0
GTEX-PX3G-0826-SM-48TZS 9.9
GTEX-ZVT3-1626-SM-5GU66 9.8
GTEX-14A5I-1726-SM-5QGQ5 9.7
GTEX-11ZVC-0726-SM-5FQT9 9.5
GTEX-12WSI-0226-SM-5GCNA 9.5
GTEX-UPIC-0926-SM-4IHLV 9.3
GTEX-14AS3-0126-SM-5Q5F4 9.0
GTEX-11DXZ-0126-SM-5EGGY 8.7
GTEX-13QJC-0726-SM-5RQJK 8.7
GTEX-139TS-1426-SM-5IFJD 8.5
GTEX-13NZB-0626-SM-5IFH6 8.4
GTEX-11WQC-0726-SM-5EQMR 8.1
GTEX-12WSD-1426-SM-5GCN9 8.1
GTEX-ZF2S-3026-SM-4WWCH 7.9
GTEX-OOBJ-0826-SM-3NB2K 7.8
GTEX-XBEC-1526-SM-4AT68 7.8
GTEX-14DAQ-1726-SM-5S2R2 7.4
GTEX-11ZTS-1426-SM-5EQMM 7.2
GTEX-13NYB-1026-SM-5IFH3 7.2
GTEX-Y5V5-0926-SM-4VBPZ 6.9
GTEX-147JS-1126-SM-5RQIW 6.7
GTEX-Q2AG-1126-SM-48U1P 6.5
GTEX-13OW6-2626-SM-5IFF2 6.3
GTEX-14E1K-0326-SM-5S2PE 6.3
GTEX-131XH-0626-SM-5LZWH 6.2
GTEX-1212Z-0226-SM-59HLF 6.1
GTEX-11NV4-1326-SM-5HL6V 6.0
GTEX-T6MN-1226-SM-3NMA5 6.0
GTEX-QEG4-1826-SM-4R1JN 5.9
GTEX-11GSP-0626-SM-5986T 5.6
GTEX-11OF3-0726-SM-5BC4Z 5.5
GTEX-145MF-0826-SM-5QGQA 5.5
GTEX-14753-1626-SM-5NQ9L 5.5
GTEX-YECK-1926-SM-4W21H 5.5
GTEX-13VXU-0926-SM-5IFFH 5.4
GTEX-RNOR-1426-SM-48FDJ 5.4
GTEX-131YS-1626-SM-5HL6C 5.3
GTEX-RN64-1826-SM-48FDV 5.3
GTEX-12WSM-0726-SM-5GCOW 5.2
GTEX-13FTZ-0726-SM-5IFFY 5.2
GTEX-11DXY-0526-SM-5EGGQ 5.0
GTEX-13112-1426-SM-5EGH8 4.5
GTEX-SJXC-1226-SM-4DM78 4.4
GTEX-11ZUS-2526-SM-59872 4.2
GTEX-WZTO-0626-SM-4PQYY 4.0
GTEX-ZYT6-0626-SM-5E45V 4.0
GTEX-11NUK-1226-SM-5P9GM 3.6
GTEX-145LU-1326-SM-5LU9N 3.4
GTEX-12ZZZ-1326-SM-59HKW 2.3
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

106.4

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 106.4
FF:10018-101C9 64,69,70 years, mixed 106.4

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