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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:109.0TPM
GTEx:17.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA002954

 

Endothelial cells

Low  

Glial cells

Not detected  

Neuronal cells

High  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

109.0

N/A Male, age 5
Sample 1
TPM: 114.9
overview Female, age 40
Sample 2
TPM: 100.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 112.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

17.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 14.1
Samples: 114

Max RPKM: 23.1
Min RPKM: 9.6
Std RPKM: 2.8
Median RPKM: 13.5
GTEX-PVOW-2526-SM-2XCF7 23.1
GTEX-QMR6-1426-SM-32PLA 22.1
GTEX-UTHO-3026-SM-3GAFB 22.1
GTEX-13G51-3026-SM-5IJB8 21.7
GTEX-T2IS-3026-SM-32QPM 20.3
GTEX-QDT8-2926-SM-32PKC 20.0
GTEX-N7MT-1126-SM-5SI7V 19.7
GTEX-111FC-3126-SM-5GZZ2 18.6
GTEX-147GR-3026-SM-5S2ML 18.5
GTEX-WL46-2926-SM-3LK82 18.3
GTEX-1445S-3026-SM-5O9BR 17.8
GTEX-13X6J-3026-SM-5Q5CU 17.7
GTEX-11NV4-2126-SM-5N9DS 17.6
GTEX-13FLW-1426-SM-5K7YE 17.4
GTEX-WZTO-2926-SM-3NM9I 17.4
GTEX-Y8DK-0826-SM-4TT3T 17.3
GTEX-X585-3026-SM-46MWF 17.1
GTEX-WWYW-3126-SM-3NB39 17.0
GTEX-13FHP-3026-SM-5IJBS 16.9
GTEX-WVLH-3026-SM-3MJG9 16.9
GTEX-T5JC-2426-SM-3NMDB 16.8
GTEX-WHSE-3026-SM-3P5ZH 16.5
GTEX-PWO3-0926-SM-2I5EY 16.4
GTEX-ZAK1-3026-SM-5S2MJ 16.4
GTEX-13X6K-2926-SM-5Q5D5 16.3
GTEX-13FHO-3026-SM-5J1O9 16.1
GTEX-QVUS-2826-SM-3GADB 16.1
GTEX-X4XX-3026-SM-3NMB2 16.1
GTEX-YFC4-3126-SM-5PNV6 16.1
GTEX-XLM4-3026-SM-4AT6L 15.8
GTEX-11DXY-3226-SM-5GIDE 15.7
GTEX-ZUA1-3026-SM-59HJC 15.7
GTEX-TSE9-3026-SM-3DB76 15.4
GTEX-13PL6-3126-SM-5LUAR 15.1
GTEX-Z93S-2926-SM-57WB9 15.1
GTEX-12ZZZ-3026-SM-5BC67 14.8
GTEX-14ASI-3026-SM-5S2PN 14.8
GTEX-11NUK-2926-SM-5A5MD 14.7
GTEX-12WSA-2926-SM-5EQ4D 14.6
GTEX-13OVH-3026-SM-5MR4N 14.6
GTEX-RNOR-2326-SM-2TF4I 14.6
GTEX-RU72-3026-SM-5SI7Y 14.6
GTEX-11ZUS-2926-SM-5FQSL 14.5
GTEX-131YS-3126-SM-5KLYT 14.4
GTEX-13NYB-3026-SM-5IJD7 14.4
GTEX-145MH-3026-SM-5Q5DZ 14.4
GTEX-12ZZX-2926-SM-5GCOQ 14.3
GTEX-14BMV-3026-SM-5S2PQ 14.3
GTEX-QVJO-1426-SM-2S1QY 14.3
GTEX-13NYC-2826-SM-5K7WR 14.2
GTEX-13OW6-3026-SM-5J2MI 14.2
GTEX-11PRG-2926-SM-5987A 14.1
GTEX-14A5I-2926-SM-5Q5CQ 14.1
GTEX-1192X-3126-SM-5N9BY 14.0
GTEX-NPJ7-2726-SM-2I3FT 13.8
GTEX-13PVQ-3026-SM-5SI93 13.7
GTEX-145MG-3026-SM-5RQJA 13.6
GTEX-13JUV-2926-SM-5LZX7 13.5
GTEX-T6MN-2626-SM-32PMQ 13.5
GTEX-13O3Q-2926-SM-5KM45 13.4
GTEX-Q2AG-2926-SM-2HMJ3 13.4
GTEX-11O72-2926-SM-5BC4V 13.3
GTEX-11TTK-2926-SM-5PNYP 13.3
GTEX-R55F-1326-SM-5S2V4 13.3
GTEX-1313W-3126-SM-5LZUI 13.2
GTEX-NPJ8-1526-SM-2D7VU 13.1
GTEX-13IVO-2926-SM-5L3CZ 13.0
GTEX-13OW7-3026-SM-5L3GY 12.9
GTEX-13VXU-2926-SM-5LU5C 12.9
GTEX-OXRN-2426-SM-2I5EQ 12.9
GTEX-ZZPT-3026-SM-5GZXH 12.9
GTEX-11EI6-3026-SM-5GZZO 12.8
GTEX-ZAJG-3126-SM-5HL9J 12.8
GTEX-144FL-3026-SM-5O99C 12.7
GTEX-145LS-3126-SM-5Q5BY 12.7
GTEX-Y111-2726-SM-4TT3N 12.7
GTEX-ZVT3-3026-SM-5E43N 12.6
GTEX-12ZZY-3026-SM-5GCOU 12.5
GTEX-ZE7O-3126-SM-5HL5X 12.5
GTEX-11DXW-1126-SM-5H12Q 12.3
GTEX-13FXS-3126-SM-5J2NN 12.3
GTEX-144GL-3026-SM-5Q5CW 12.3
GTEX-ZYFD-3026-SM-5E44C 12.3
GTEX-13O3O-3126-SM-5KM3H 12.2
GTEX-13QIC-2926-SM-5J2NF 12.1
GTEX-1117F-3226-SM-5N9CT 12.0
GTEX-1128S-2726-SM-5H12C 12.0
GTEX-12WSH-3026-SM-5CVNI 11.9
GTEX-13JVG-3126-SM-5L3FH 11.9
GTEX-13OVJ-2826-SM-5L3GW 11.9
GTEX-1399T-3026-SM-5KLZC 11.8
GTEX-XOTO-3026-SM-4B65M 11.8
GTEX-11EMC-3226-SM-5EGKW 11.7
GTEX-11OF3-2926-SM-5HL78 11.7
GTEX-132Q8-3026-SM-5PNVG 11.7
GTEX-139T8-1026-SM-5J2MC 11.4
GTEX-YJ89-3026-SM-5IFJI 11.4
GTEX-11GSP-3226-SM-5986O 11.2
GTEX-12126-1026-SM-5P9JJ 11.2
GTEX-11WQK-3026-SM-5EQL6 11.1
GTEX-131XW-3126-SM-5LZUC 11.0
GTEX-12ZZW-2926-SM-5LZUP 10.8
GTEX-13NYS-3126-SM-5KLYV 10.8
GTEX-13OW8-2826-SM-5L3GC 10.7
GTEX-11GS4-3126-SM-5A5LH 10.6
GTEX-12WSC-3026-SM-5GCNF 10.6
GTEX-12WSD-3126-SM-5HL7P 10.6
GTEX-13SLX-3126-SM-5S2Q5 10.6
GTEX-11GSO-2926-SM-5HL73 10.5
GTEX-13S7M-3126-SM-5RQJQ 10.5
GTEX-11OC5-0726-SM-5P9JK 10.4
GTEX-145MF-2726-SM-5O995 10.4
GTEX-11ONC-2926-SM-5P9JM 9.7
GTEX-117XS-3026-SM-5N9CA 9.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 20.0
Samples: 108

Max RPKM: 39.7
Min RPKM: 8.9
Std RPKM: 5.6
Median RPKM: 19.2
GTEX-QDT8-0011-R10A-SM-32PKG 39.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 39.3
GTEX-WVLH-0011-R10A-SM-3MJFM 33.8
GTEX-WWYW-0011-R10A-SM-3NB35 31.8
GTEX-YFC4-0011-R10a-SM-4SOK5 30.7
GTEX-QMR6-0011-R10A-SM-32PKO 29.5
GTEX-WL46-0011-R10A-SM-3MJFQ 28.9
GTEX-T6MN-0011-R10A-SM-32QP7 28.6
GTEX-P44H-0011-R10A-SM-2XCEK 28.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 28.4
GTEX-13JVG-0011-R10b-SM-5KM2P 28.2
GTEX-12WSD-0011-R10b-SM-5GU79 27.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 27.3
GTEX-YJ89-0011-R10a-SM-4SOK9 26.9
GTEX-S7SE-0011-R10A-SM-2XCDF 26.3
GTEX-Z93S-0011-R10a-SM-4RGNM 26.1
GTEX-X585-0011-R10A-SM-46MUY 26.0
GTEX-12WSE-0011-R10b-SM-5P9JV 25.8
GTEX-13X6I-0011-R10a-SM-5PNWI 25.8
GTEX-131XH-0011-R10a-SM-5EGLJ 25.5
GTEX-145MH-0011-R10b-SM-5PNUK 25.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 24.5
GTEX-13FLW-0011-R10b-SM-5LZZF 24.1
GTEX-139TS-0011-R10a-SM-5K7TU 23.5
GTEX-XMD1-0011-R10A-SM-4AT4A 23.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 23.4
GTEX-13X6J-0011-R10b-SM-5PNWA 23.0
GTEX-T5JC-0011-R10A-SM-32PM2 22.6
GTEX-X4XX-0011-R10B-SM-46MWO 22.3
GTEX-145MG-0011-R10a-SM-5PNWG 21.6
GTEX-QVUS-0011-R10A-SM-3GIK3 21.5
GTEX-WZTO-0011-R10B-SM-4E3KB 21.5
GTEX-14BIN-0011-R10a-SM-5S2UA 21.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 21.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 20.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 20.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 20.7
GTEX-N7MS-0011-R10A-SM-2HMJK 20.6
GTEX-12126-0011-R10b-SM-5BC6T 20.5
GTEX-12WSC-0011-R10a-SM-5GU57 20.4
GTEX-13O3Q-0011-R10b-SM-5KM39 20.3
GTEX-ZXG5-0011-R10a-SM-57WDD 20.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 20.0
GTEX-12WSM-0011-R10a-SM-5DUWV 19.9
GTEX-TSE9-0011-R10A-SM-3DB7O 19.8
GTEX-11H98-0011-R10b-SM-5NQ98 19.7
GTEX-13X6K-0011-R10a-SM-5P9JR 19.7
GTEX-XLM4-0011-R10A-SM-4AT5P 19.7
GTEX-13FHO-0011-R10b-SM-5J2MM 19.6
GTEX-NL3H-0011-R10A-SM-2I3E9 19.6
GTEX-13QIC-0011-R10a-SM-5O9C7 19.5
GTEX-ZVT3-0011-R10b-SM-57WB6 19.4
GTEX-13S7M-0011-R10b-SM-5PNZB 19.3
GTEX-OXRN-0011-R10A-SM-2I5GC 19.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 19.2
GTEX-131YS-0011-R10b-SM-5EQ5N 19.1
GTEX-13OVL-0011-R10a-SM-5L3GS 19.0
GTEX-11ZUS-0011-R10b-SM-5BC79 18.9
GTEX-1313W-0011-R10b-SM-5DUXA 18.9
GTEX-12WSH-0011-R10a-SM-5LZUS 18.8
GTEX-ZUA1-0011-R10a-SM-51MT6 18.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 18.6
GTEX-147GR-0011-R10b-SM-5S2UM 18.5
GTEX-13CZV-0011-R10b-SM-5LZYD 18.4
GTEX-12WSF-0011-R10a-SM-5LZVH 18.3
GTEX-145LS-0011-R10a-SM-5PNUQ 18.3
GTEX-13N2G-0011-R10a-SM-5MR34 18.1
GTEX-13FXS-0011-R10a-SM-5J2MA 18.0
GTEX-13G51-0011-R10b-SM-5LZYF 18.0
GTEX-N7MT-0011-R10A-SM-2I3E1 17.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 17.8
GTEX-13JUV-0011-R10b-SM-5LZXR 17.6
GTEX-145LU-0011-R10a-SM-5PNWJ 17.6
GTEX-NL4W-0011-R10A-SM-2I3DY 17.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 17.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 17.2
GTEX-ZF28-0011-R10a-SM-4WWEH 17.0
GTEX-13O3O-0011-R10a-SM-5LUA9 16.9
GTEX-11WQK-0011-R10a-SM-5BC6R 16.8
GTEX-12WSA-0011-R10b-SM-5P9ET 16.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 16.5
GTEX-13NYB-0011-R10a-SM-5KM43 16.1
GTEX-13SLW-0011-R10a-SM-5S2UI 16.1
GTEX-147F4-0011-R10b-SM-5S2WC 15.9
GTEX-X4EP-0011-R10B-SM-4QASJ 15.9
GTEX-13OW6-0011-R10a-SM-5L3HE 15.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 15.6
GTEX-X261-0011-R10B-SM-4E3JT 15.3
GTEX-13N1W-0011-R10b-SM-5MR4H 15.1
GTEX-1445S-0011-R10a-SM-5PNWB 15.0
GTEX-14BIL-0011-R10a-SM-5SI75 15.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 14.8
GTEX-11WQC-0011-R10a-SM-57WCT 14.7
GTEX-RVPU-0011-R10A-SM-2XCAH 14.5
GTEX-13OW8-0011-R10a-SM-5L3H6 14.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 13.9
GTEX-13SLX-0011-R10a-SM-5P9HV 13.8
GTEX-14753-0011-R10b-SM-5S2WE 13.6
GTEX-13OW7-0011-R10a-SM-5L3H3 13.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 13.1
GTEX-ZV68-0011-R10a-SM-51MT7 12.9
GTEX-OXRO-0011-R10A-SM-2I5EH 12.7
GTEX-13NYS-0011-R10a-SM-5MR4S 12.3
GTEX-13QJC-0011-R10a-SM-5SI63 12.1
GTEX-13IVO-0011-R10a-SM-5LZY3 11.8
GTEX-1477Z-0011-R10b-SM-5S2RF 11.2
GTEX-13NZA-0011-R10b-SM-5KM54 10.9
GTEX-131XW-0011-R10a-SM-5DUVA 8.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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